RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 UNKLQ9H9P5 680 aaKnown RBP13□□□□□ -0.33
CTHRC1-201ENST00000330295 RRAGDQ9NQL2 400 aaPredicted RBP13□□□□□ -0.33
CTHRC1-201ENST00000330295 ZNF225Q9UK10 706 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 GNG14A0A1W2PPG7 69 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 C1orf226A1L170 272 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 LILRA1O75019 489 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 DHRS4L1P0CG22 281 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 S1PR1P21453 382 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 GSTM5P46439 218 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 SPDYAQ5MJ70 313 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 TMEM108Q6UXF1 575 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 SSX8Q7RTT4 187 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 SAMD14Q8IZD0 417 aaPredicted RBP12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 C1orf52Q8N6N3 182 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 OR2M3Q8NG83 312 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 TMBIM1Q969X1 311 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 PAQR5Q9NXK6 330 aaPredicted RBP12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 PPP4R1LQ9P1A2 415 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 MCM8Q9UJA3 840 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 CFL2Q9Y281 166 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 SPEF1Q9Y4P9 236 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 TIMM22Q9Y584 194 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 PCNX3Q9H6A9 2034 aa12.99□□□□□ -0.33
CTHRC1-201ENST00000330295 NPIPA5A0A0B4J1W7 369 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SERTM1A2A2V5 107 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 NPIPA7E9PJI5 369 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SPAG7O75391 227 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 REM1O75628 298 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SYNGR4O95473 234 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 NPIPA8P0DM63 369 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 UROSP10746 265 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 PTAFRP25105 342 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 HEPACAMQ14CZ8 416 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 CEP85LQ5SZL2 805 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 NUFIP2Q7Z417 695 aaKnown RBP12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 GALNT10Q86SR1 603 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 GLCCI1Q86VQ1 547 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 ZDHHC22Q8N966 263 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 RNF138Q8WVD3 245 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SLC35A4Q96G79 324 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SNX18Q96RF0 628 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 ADOQ96SZ5 270 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 INPP5KQ9BT40 448 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SUCNR1Q9BXA5 334 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 PFDN4Q9NQP4 134 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 GIMAP4Q9NUV9 329 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 ING1Q9UK53 422 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 PCDHA9Q9Y5H5 950 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 ZNF780BQ9Y6R6 833 aa12.98□□□□□ -0.33
CTHRC1-201ENST00000330295 SLC28A1O00337 649 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 TO15178 435 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 PCDH7O60245 1069 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 LYZL6O75951 148 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 CSNK2A2P19784 350 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 NT5EP21589 574 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 SERPINB5P36952 375 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 ALDH9A1P49189 494 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 XKP51811 444 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 BTKQ06187 659 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 GALNT1Q10472 559 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 TCHHL1Q5QJ38 904 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 TMEM201Q5SNT2 666 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 TIMM23BQ5SRD1 257 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 GTF2IRD2BQ6EKJ0 949 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 LRIG3Q6UXM1 1119 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 GTF2IRD2Q86UP8 949 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 METTL2AQ96IZ6 378 aaKnown RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 GATA5Q9BWX5 397 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 ACPTQ9BZG2 426 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 SHCBP1LQ9BZQ2 653 aa12.97□□□□□ -0.33
CTHRC1-201ENST00000330295 B4DSR2 109 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 AZIN1O14977 448 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 PGRMC2O15173 223 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 RGS14O43566 566 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 CXCL13O43927 109 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 NPHS1O60500 1241 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 ERAL1O75616 437 aaKnown RBP12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 SNUPNO95149 360 aaKnown RBP12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 ANXA4P09525 319 aaPredicted RBP12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 NEFHP12036 1026 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 DRD5P21918 477 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 CD40P25942 277 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 GIFP27352 417 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 APOBEC3AP31941 199 aaPredicted RBP12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 PPICP45877 212 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 MAP4K2Q12851 820 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 PCLAFQ15004 111 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 SLC48A1Q6P1K1 146 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 TRIM46Q7Z4K8 759 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 KLHL29Q96CT2 875 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms