RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 C17orf47Q8NEP4 570 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 IP6K3Q96PC2 410 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 MAN2C1Q9NTJ4 1040 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 WWP2O00308 870 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 AP3D1O14617 1153 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 OR10H3O60404 316 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 ANGPTL1O95841 491 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 PRKAR1AP10644 381 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 NID1P14543 1247 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 RGS8P57771 180 aaPredicted RBP17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 BROXQ5VW32 411 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 KLHL17Q6TDP4 642 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 ZNF248Q8NDW4 579 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 OR5L2Q8NGL0 311 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 SNIP1Q8TAD8 396 aaKnown RBP17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 GTPBP3Q969Y2 492 aaKnown RBP17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 DGCR14Q96DF8 476 aaKnown RBP17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 POLR2J2Q9GZM3 115 aaKnown RBP17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 POLR2J3Q9H1A7 115 aaKnown RBP17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 ARMC7Q9H6L4 198 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 FRYQ5TBA9 3013 aa17.24■□□□□ 0.35
EXOSC3-201ENST00000327304 NPIPA5A0A0B4J1W7 369 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 NPIPA7E9PJI5 369 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 TO15178 435 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 KLK10O43240 276 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 ZNF354AO60765 605 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 NPIPA8P0DM63 369 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 EEF1B2P24534 225 aaKnown RBP17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 UGT2B15P54855 530 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 TAS2R41P59536 307 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 CSNK2BP67870 215 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 TEKQ02763 1124 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 ST3GAL3Q11203 375 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 DCAF10Q5QP82 559 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 PGBD2Q6P3X8 592 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 PODNL1Q6PEZ8 512 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 CCDC71Q8IV32 467 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 DIO2Q92813 273 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 TP53INP1Q96A56 240 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 EFHD2Q96C19 240 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 UCK2Q9BZX2 261 aa17.23■□□□□ 0.35
EXOSC3-201ENST00000327304 TPST2O60704 377 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 ABCB7O75027 752 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 CYP7B1O75881 506 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 NADKO95544 446 aaPredicted RBP17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 SERPINA7P05543 415 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 ICAM2P13598 275 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 OSMP13725 252 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 POU2F1P14859 743 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 COX10Q12887 443 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 TRAM2Q15035 370 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 DECR1Q16698 335 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 FCRLBQ6BAA4 426 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 CD300LDQ6UXZ3 194 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 DEPDC4Q8N2C3 294 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 TOR1AIP2Q8NFQ8 470 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 CNIH3Q8TBE1 160 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 SLC38A4Q969I6 547 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 HSPBAP1Q96EW2 488 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 RBM38Q9H0Z9 239 aaKnown RBP17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 CXorf56Q9H5V9 222 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 MYOTQ9UBF9 498 aa17.22■□□□□ 0.35
EXOSC3-201ENST00000327304 CENPVL1A0A0U1RR11 272 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 MAN1A2O60476 641 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 OR5F1O95221 314 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 ABCD3P28288 659 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 CRISP1P54107 249 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 PLCXD2Q0VAA5 305 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 MAPK14Q16539 360 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 ENTHD1Q8IYW4 607 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 SLC34A3Q8N130 599 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 OMA1Q96E52 524 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 TPRKBQ9Y3C4 175 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 ZAR1LA6NP61 321 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 EFSO43281 561 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 FRS3O43559 492 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 OR2J2O76002 312 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 OR6B1O95007 311 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 IL33O95760 270 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 TTKP33981 857 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 ENTPD8Q5MY95 495 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 DESI1Q6ICB0 168 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 C1orf94Q6P1W5 598 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 KCTD8Q6ZWB6 473 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 RANBP3LQ86VV4 465 aaPredicted RBP17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 BPIFB6Q8NFQ5 453 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 OR4K5Q8NGD3 323 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 MCHR1Q99705 422 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 G6PC3Q9BUM1 346 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 CCDC86Q9H6F5 360 aaKnown RBP17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 VCX3AQ9NNX9 186 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 SCN3BQ9NY72 215 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 REV1Q9UBZ9 1251 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 KCNE5Q9UJ90 142 aa17.21■□□□□ 0.35
EXOSC3-201ENST00000327304 CDHR4A6H8M9 788 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF891A8MT65 544 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 MRPS14O60783 128 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 REM1O75628 298 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms