RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SERINC4A6NH21 518 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 ARHGAP33O14559 1287 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 RAB36O95755 333 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 SPHARQ15513 63 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 SSX1Q16384 188 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 KLHL22Q53GT1 634 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 TMEM71Q6P5X7 295 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 C19orf48Q6RUI8 117 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 TMPRSS11FQ6ZWK6 438 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 ATCAYQ86WG3 371 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 PRSS58Q8IYP2 241 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 SAP25Q8TEE9 199 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 PIGKQ92643 395 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 PLEKHA8Q96JA3 519 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 HS6ST2Q96MM7 605 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 DUSP23Q9BVJ7 150 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 MND1Q9BWT6 205 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 DCSTAMPQ9H295 470 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 RNF167Q9H6Y7 350 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 PCDHGA3Q9Y5H0 932 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 NUP210LQ5VU65 1888 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 LY6G6EA0A0G2JKS1 128 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 A0A1B0GX78 115 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 SNTNA6NMZ2 147 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 CSTAP01040 98 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 TBXA2RP21731 343 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 OPRL1P41146 370 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 MTNR1AP48039 350 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 LIMK1P53667 647 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 HLA-BQ31612 363 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 ALG10BQ5I7T1 473 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 PERM1Q5SV97 790 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 ARHGAP40Q5TG30 622 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 AADACL4Q5VUY2 407 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF550Q7Z398 422 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 LAPTM4BQ86VI4 370 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 CDK20Q8IZL9 346 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 CADM2Q8N3J6 435 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 SLC15A4Q8N697 577 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 PROKR2Q8NFJ6 384 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 FANK1Q8TC84 345 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 CHCHD6Q9BRQ6 235 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 TAPBPLQ9BX59 468 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 PRMT8Q9NR22 394 aaPredicted RBP16.91■□□□□ 0.3
CCDC43-201ENST00000315286 OSGIN1Q9UJX0 560 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 CARD8Q9Y2G2 431 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 U3KQA8 63 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 ADAMTS9Q9P2N4 1935 aa16.91■□□□□ 0.3
CCDC43-201ENST00000315286 SYNDIG1LA6NDD5 238 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 AGRPO00253 132 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 CCRL2O00421 344 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SIGLEC6O43699 453 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 DDAH2O95865 285 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 IGKV3-11P04433 115 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SCG5P05408 212 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 HBQ1P09105 142 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 UGT2B10P36537 528 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ETV5P41161 510 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 PPICP45877 212 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ETV1P50549 477 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 CTBP2P56545 445 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ZXDAP98168 799 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 RAB40BQ12829 278 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 NR0B2Q15466 257 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ZSWIM7Q19AV6 140 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ANKDD1AQ495B1 522 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 PLK5Q496M5 336 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 KIRREL2Q6UWL6 708 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ADCK1Q86TW2 530 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 CMIPQ8IY22 773 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 OR13C2Q8NGS9 318 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 OR4C6Q8NH72 309 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SLC2A12Q8TD20 617 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF721Q8TF20 911 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SLC35B4Q969S0 331 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SLC46A1Q96NT5 459 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 CENPOQ9BU64 300 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF426Q9BUY5 554 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SLIRPQ9GZT3 109 aaKnown RBP16.9■□□□□ 0.3
CCDC43-201ENST00000315286 NXF5Q9H1B4 397 aaKnown RBP16.9■□□□□ 0.3
CCDC43-201ENST00000315286 MED17Q9NVC6 651 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 TMEM5Q9Y2B1 443 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 WDR87Q6ZQQ6 2873 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 TCRBV16S1A1N1A0A5B0 115 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 HMGN1P05114 100 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 NGFRP08138 427 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SAGP10523 405 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-201ENST00000315286 PNLIPP16233 465 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 RORAP35398 523 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SOX3P41225 446 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 NSDHLQ15738 373 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 KLHL26Q53HC5 615 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 BMP8AQ7Z5Y6 402 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 BORCS5Q969J3 196 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 VMP1Q96GC9 406 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SH3YL1Q96HL8 342 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-201ENST00000315286 FGF20Q9NP95 211 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SUSD2Q9UGT4 822 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 SIGLEC7Q9Y286 467 aa16.9■□□□□ 0.3
CCDC43-201ENST00000315286 CORINQ9Y5Q5 1042 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms