RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MTHFD2LQ9H903 347 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 GPR52Q9Y2T5 361 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 C7orf72A4D263 438 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CER1O95813 267 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 IFNA4P05014 189 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 GCAP28676 217 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CD68P34810 354 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SOX3P41225 446 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CCR5P51681 352 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF41P51814 821 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 TAS2R31P59538 309 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ID2Q02363 134 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 MLLT11Q13015 90 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 PDSS1Q5T2R2 415 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF683Q8IZ20 524 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 IQCF1Q8N6M8 205 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR52E2Q8NGJ4 325 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 WDR20Q8TBZ3 569 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 MYEOVQ96EZ4 313 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SYT3Q9BQG1 590 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 INPP5KQ9BT40 448 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZDHHC5Q9C0B5 715 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 GON4LQ3T8J9 2241 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SMAD6O43541 496 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 RAB3DO95716 219 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 MAS1P04201 325 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 PIM1P11309 404 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 P2RY2P41231 377 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 RAP2BP61225 183 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 LRRC28Q86X40 367 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CPOQ8IVL8 374 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZSCAN4Q8NAM6 433 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CHST14Q8NCH0 376 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR5H6Q8NGV6 325 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 BORCS8Q96FH0 119 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 APIPQ96GX9 242 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 FAM86C1Q9NVL1 165 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 A0A1W2PQU0 124 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 C11orf98E9PRG8 122 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 PRAMEF26H0Y7S4 382 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SSX4O60224 188 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ALPLP05186 524 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF16P17020 682 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CBLP22681 906 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 DLSTP36957 453 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 POU4F3Q15319 338 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 FRMPD2BQ6IN97 320 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 KIAA1211LQ6NV74 962 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SHFQ7M4L6 423 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 SPRED1Q7Z699 444 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 LAS2Q8IYD9 372 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ACBD4Q8NC06 268 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR5D16Q8NGK9 328 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 NINJ1Q92982 152 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR8D2Q9GZM6 311 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 FN3KQ9H479 309 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 MCCC2Q9HCC0 563 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 DOCK6Q96HP0 2047 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 H3BUI4 141 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 BCAT2O15382 392 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 HCRTR2O43614 444 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 AP1G1O43747 822 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ADAM23O75077 832 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 NUDT7P0C024 238 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ADORA3P0DMS8 318 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 CD27P26842 260 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 GKP32189 559 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 MMP12P39900 470 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ETV3P41162 512 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM107Q6UX40 140 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZER1Q7Z7L7 766 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ARHGAP12Q8IWW6 846 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR1J4Q8NGS1 313 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 CDC6Q99741 560 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 BRF2Q9HAW0 419 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 WSB2Q9NYS7 404 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC7A11Q9UPY5 501 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR51B4Q9Y5P0 310 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 RNASET2O00584 256 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 YKT6O15498 198 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 PRAMEF2O60811 474 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 SNAPINO95295 136 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 FGL2Q14314 439 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 AMZ1Q400G9 498 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 HES5Q5TA89 166 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM215Q68D42 235 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 B3GNT8Q7Z7M8 397 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR5AK2Q8NH90 309 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF417Q8TAU3 575 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 MRGPRX3Q96LB0 322 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 MVB12BQ9H7P6 319 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 METTL7AQ9H8H3 244 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 KCNJ16Q9NPI9 418 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 PRTFDC1Q9NRG1 225 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
SYNGAP1-201ENST00000293748 C9J4A7 227 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms