RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 NTNG1Q9Y2I2 539 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 RPL36Q9Y3U8 105 aaKnown RBP14.14□□□□□ -0.15
SF3B4-201ENST00000271628 M0R129 80 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 IGKV1D-16P01601 117 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 PRG2P13727 222 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 RORAP35398 523 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 LIMK1P53667 647 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 SLC37A1P57057 533 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 FGFBP1Q14512 234 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ELAVL1Q15717 326 aaKnown RBP14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ARMCX4Q5H9R4 360 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 PRAMEF17Q5VTA0 474 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF574Q6ZN55 896 aaPredicted RBP14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF367Q7RTV3 350 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF550Q7Z398 422 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 SLC22A16Q86VW1 577 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 FAM26EQ8N5C1 309 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF614Q8N883 585 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 BCORP1Q8N888 145 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 TCEANCQ8N8B7 351 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 ART5Q96L15 291 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 PRSS27Q9BQR3 290 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 IL20Q9NYY1 176 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 CNIH4Q9P003 139 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 PCDHGA3Q9Y5H0 932 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 MYO15AQ9UKN7 3530 aa14.14□□□□□ -0.15
SF3B4-201ENST00000271628 RP1P56715 2156 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 LY6G6EA0A0G2JKS1 128 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 NPIPB9F8W1W9 429 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 ENTPD6O75354 484 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 HTR2AP28223 471 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 S100A5P33763 92 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 PPICP45877 212 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 SLC15A1P46059 708 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 EIF2B2P49770 351 aaKnown RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 PRKCDQ05655 676 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 TIMM50Q3ZCQ8 353 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 RHBDD2Q6NTF9 364 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 MRGPREQ86SM8 312 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 LYSMD2Q8IV50 215 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 CDK20Q8IZL9 346 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 CLDN22Q8N7P3 220 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 TMEM239Q8WW34 195 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 DAZLQ92904 295 aaKnown RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 HS6ST2Q96MM7 605 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 SLC38A2Q96QD8 506 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 TRIM2Q9C040 744 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 HOXD1Q9GZZ0 328 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 EGLN3Q9H6Z9 239 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 ITGB1BP2Q9UKP3 347 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 FBXO4Q9UKT5 387 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 ATXN7L1Q9ULK2 861 aaPredicted RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 U3KQA8 63 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 ASXL3Q9C0F0 2248 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 SNTNA6NMZ2 147 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 KLF4O43474 513 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 TLX2O43763 284 aaPredicted RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 PTHP01270 115 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 CLPSP04118 112 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 DCAF7P61962 342 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 EFNB1P98172 346 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 RHAGQ02094 409 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 ACSM5Q6NUN0 579 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 KIF18BQ86Y91 864 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 LSMEM1Q8N8F7 131 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 CNOT9Q92600 299 aaKnown RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 CDADC1Q9BWV3 514 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 C6orf62Q9GZU0 229 aaPredicted RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 LRRN3Q9H3W5 708 aa14.13□□□□□ -0.15
SF3B4-201ENST00000271628 MRTO4Q9UKD2 239 aaKnown RBP14.13□□□□□ -0.15
SF3B4-201ENST00000271628 A0A1W2PQM1 296 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 CER1O95813 267 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 DBTP11182 482 aaKnown RBP14.12□□□□□ -0.15
SF3B4-201ENST00000271628 CCL7P80098 99 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 NCF4Q15080 339 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 NSDHLQ15738 373 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 SNAPC1Q16533 368 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 VWA2Q5GFL6 755 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 PLAG1Q6DJT9 500 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 OR14A16Q8NHC5 309 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 FSCN3Q9NQT6 498 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 INIPQ9NRY2 104 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 DNAJB12Q9NXW2 375 aaKnown RBP14.12□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF229Q9UJW7 825 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 TMEM5Q9Y2B1 443 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 PEX16Q9Y5Y5 336 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 ADAMTS20P59510 1910 aa14.12□□□□□ -0.15
SF3B4-201ENST00000271628 NUP210LQ5VU65 1888 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 CHP2O43745 196 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 TMED10P49755 219 aaKnown RBP14.11□□□□□ -0.15
SF3B4-201ENST00000271628 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.11□□□□□ -0.15
SF3B4-201ENST00000271628 KRR1Q13601 381 aaKnown RBP14.11□□□□□ -0.15
SF3B4-201ENST00000271628 C1orf189Q5VU69 101 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 C19orf48Q6RUI8 117 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 TMPRSS9Q7Z410 1059 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 EID2Q8N6I1 236 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 IQCF1Q8N6M8 205 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms