RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 MENTQ9BUN1 341 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 C2orf42Q9NWW7 574 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 IL20Q9NYY1 176 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 MGAT4AQ9UM21 535 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 CDH10Q9Y6N8 788 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 BTN3A3O00478 584 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 TBX19O60806 448 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 RGS9O75916 674 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 HMGN1P05114 100 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 STAT5AP42229 794 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 OR3A3P47888 321 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 OR12D2P58182 307 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC25A35Q3KQZ1 300 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 PRPF38BQ5VTL8 546 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 TCTE3Q8IZS6 198 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 SUN5Q8TC36 379 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 FANK1Q8TC84 345 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF431Q8TF32 576 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 CD180Q99467 661 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 MKRN2Q9H000 416 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC6A20Q9NP91 592 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 FBXO34Q9NWN3 711 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 STMN3Q9NZ72 180 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 NLGN3Q9NZ94 848 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 TP53BP1Q12888 1972 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 LRRC72A6NJI9 287 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 DNAJB6O75190 326 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 DHFRP00374 187 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 APODP05090 189 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 F3P13726 295 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 SSTR2P30874 369 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 CCR6P51684 374 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 VASNQ6EMK4 673 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 PTCRAQ6ISU1 281 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 DUSP18Q8NEJ0 188 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 TRMT10AQ8TBZ6 339 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 HCAR2Q8TDS4 363 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ORAI1Q96D31 301 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 COQ7Q99807 217 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ACTRT3Q9BYD9 372 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 WSB2Q9NYS7 404 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 MARK1Q9P0L2 795 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 STON1Q9Y6Q2 735 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC43A1O75387 559 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 KLF8O95600 359 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 FPR3P25089 353 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 GIFP27352 417 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ACSL1P33121 698 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 P2RX3P56373 397 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 SGCGQ13326 291 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM209AQ5JX71 171 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 PRSS45Q7RTY3 260 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF485Q8NCK3 441 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 C17orf47Q8NEP4 570 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 OR13C2Q8NGS9 318 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 C4orf36Q96KX1 117 aa13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 POLMQ9NP87 494 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 MRPS18AQ9NVS2 196 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-201ENST00000261674 ATG2AQ2TAZ0 1938 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC9B1P1A6NJY1 282 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 TRMT12Q53H54 448 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 COX14Q96I36 57 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 TRIM36Q9NQ86 728 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF443Q9Y2A4 671 aaPredicted RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 CA5BQ9Y2D0 317 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 UNC119BA6NIH7 251 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 PRR23D1E9PI22 279 aaPredicted RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 PEX12O00623 359 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 LDB3O75112 727 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF888P0CJ79 500 aaPredicted RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 PRR23D2P0DMB1 279 aaPredicted RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 TFPIP10646 304 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 SNRPBP14678 240 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 MAKP20794 623 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 CTHP32929 405 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 PITPNBP48739 271 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 HTR4Q13639 388 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 MAPK14Q16539 360 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 DUSP5Q16690 384 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM35AQ53FP2 167 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 BICRALQ6AI39 1079 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 LAMTOR1Q6IAA8 161 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 KIAA1324Q6UXG2 1013 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM184AQ6ZMB5 413 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 THSD4Q6ZMP0 1018 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 MBOAT2Q6ZWT7 520 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 ARL14Q8N4G2 192 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 TTLQ8NG68 377 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 OR10G6Q8NH81 332 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 OR14C36Q8NHC7 312 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 RLN3Q8WXF3 142 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 HLA-CQ95604 372 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms