RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 RGS9O75916 674 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 DBIP07108 87 aaKnown RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 UGT2B7P16662 529 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 TBXA2RP21731 343 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 RPS4Y1P22090 263 aaKnown RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 CFL1P23528 166 aaKnown RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 GNG2P59768 71 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 KLHL12Q53G59 568 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 PRPF38BQ5VTL8 546 aaKnown RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 PRSS41Q7RTY9 318 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 OR4N4Q8N0Y3 316 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 OR10G6Q8NH81 332 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 RNF170Q96K19 258 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 TMEM168Q9H0V1 697 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 RBFOX1Q9NWB1 397 aaKnown RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 CLDND1Q9NY35 253 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 LYRM1O43325 122 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 LYPD3O95274 346 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 NID1P14543 1247 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 BMP7P18075 431 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 POLR2CP19387 275 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 CTBP2P56545 445 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 BDH1Q02338 343 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 HTR4Q13639 388 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 KIR2DS3Q14952 304 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 FIGNL1Q6PIW4 674 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 FIGLAQ6QHK4 219 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 PAMR1Q6UXH9 720 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 COX18Q8N8Q8 333 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 ASB12Q8WXK4 309 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 KISS1RQ969F8 398 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 ZC3HAV1LQ96H79 300 aaKnown RBP13.34□□□□□ -0.27
HIF3A-202ENST00000244303 GDF15Q99988 308 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 TMEM43Q9BTV4 400 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 FN3KQ9H479 309 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 BABAM2Q9NXR7 383 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 NCKAP1Q9Y2A7 1128 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
HIF3A-202ENST00000244303 CDHR4A6H8M9 788 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 URADA6NGE7 173 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 REM1O75628 298 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 ELK1P19419 428 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 GALP22466 123 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 PTBP1P26599 531 aaKnown RBP eCLIP13.33□□□□□ -0.28
HIF3A-202ENST00000244303 KIAA1024LP59773 190 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 RIN1Q13671 783 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 CCDC58Q4VC31 144 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 IDNKQ5T6J7 187 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 RNF113BQ8IZP6 322 aaKnown RBP13.33□□□□□ -0.28
HIF3A-202ENST00000244303 LNX2Q8N448 690 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 TMEM52Q8NDY8 209 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 OR13C2Q8NGS9 318 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 CD93Q9NPY3 652 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 NLKQ9UBE8 527 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 SCML1Q9UN30 329 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 F5P12259 2224 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 DAPL1A0PJW8 107 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 TNFSF14O43557 240 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 FGF17O60258 216 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 HOXC4P09017 264 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-202ENST00000244303 FAM157BP0CG42 384 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 NT5EP21589 574 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 HLA-DMAP28067 261 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 CSTF1Q05048 431 aaKnown RBP13.33□□□□□ -0.28
HIF3A-202ENST00000244303 NFATC4Q14934 902 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 EXOSC7Q15024 291 aaKnown RBP13.33□□□□□ -0.28
HIF3A-202ENST00000244303 FCRLBQ6BAA4 426 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 ABHD13Q7L211 337 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 DUSP18Q8NEJ0 188 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 OR10H4Q8NGA5 316 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 IFT27Q9BW83 186 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 ADAM30Q9UKF2 790 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 PILRAQ9UKJ1 303 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 ALG5Q9Y673 324 aa13.33□□□□□ -0.28
HIF3A-202ENST00000244303 SPTBN5Q9NRC6 3674 aaKnown RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 FAM240BA0A1B0GVZ2 78 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SYNDIG1LA6NDD5 238 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SLC19A2O60779 497 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 RASGRP1O95267 797 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 MRPL3P09001 348 aaKnown RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 MTNR1BP49286 362 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SLC16A1P53985 500 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 RPS7P62081 194 aaKnown RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 FOXK2Q01167 660 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 CAMKVQ8NCB2 501 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 OR5T3Q8NGG3 340 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 PTP4A1Q93096 173 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 BPIFA2Q96DR5 249 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 WDR92Q96MX6 357 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 KCNJ15Q99712 375 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms