RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 NID1P14543 1247 aa16■□□□□ 0.15
NEK3-206ENST00000611833 MAKP20794 623 aa16■□□□□ 0.15
NEK3-206ENST00000611833 MYL9P24844 172 aa16■□□□□ 0.15
NEK3-206ENST00000611833 MRPS15P82914 257 aaKnown RBP16■□□□□ 0.15
NEK3-206ENST00000611833 TFF2Q03403 129 aa16■□□□□ 0.15
NEK3-206ENST00000611833 KLHL12Q53G59 568 aa16■□□□□ 0.15
NEK3-206ENST00000611833 WDR88Q6ZMY6 472 aa16■□□□□ 0.15
NEK3-206ENST00000611833 MEPCEQ7L2J0 689 aaKnown RBP16■□□□□ 0.15
NEK3-206ENST00000611833 PRSS41Q7RTY9 318 aa16■□□□□ 0.15
NEK3-206ENST00000611833 CDK20Q8IZL9 346 aa16■□□□□ 0.15
NEK3-206ENST00000611833 ZFPM2Q8WW38 1151 aa16■□□□□ 0.15
NEK3-206ENST00000611833 MRGPRX1Q96LB2 322 aa16■□□□□ 0.15
NEK3-206ENST00000611833 JAM3Q9BX67 310 aa16■□□□□ 0.15
NEK3-206ENST00000611833 C20orf141Q9NUB4 165 aa16■□□□□ 0.15
NEK3-206ENST00000611833 FBXO34Q9NWN3 711 aa16■□□□□ 0.15
NEK3-206ENST00000611833 SHISA3A0PJX4 238 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 HCN1O60741 890 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 COQ9O75208 318 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 APBB3O95704 486 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 QPRTQ15274 297 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 NDUFA5Q16718 116 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 FHL5Q5TD97 284 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 NIPAL3Q6P499 406 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 FIGNL1Q6PIW4 674 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 METAP1DQ6UB28 335 aaPredicted RBP15.99■□□□□ 0.15
NEK3-206ENST00000611833 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 CDRT4Q8N9R6 151 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 ZFYVE21Q9BQ24 234 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 ALG8Q9BVK2 526 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 PPP1R3EQ9H7J1 279 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 RNF121Q9H920 327 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 ZNF223Q9UK11 482 aaPredicted RBP15.99■□□□□ 0.15
NEK3-206ENST00000611833 ARHGEF17Q96PE2 2063 aaPredicted RBP15.99■□□□□ 0.15
NEK3-206ENST00000611833 SYNDIG1LA6NDD5 238 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 FAM86C2PA6NEL3 165 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 TTC36A6NLP5 189 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 H0YGG7 62 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 RNF13O43567 381 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 FGF17O60258 216 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 GAAP10253 952 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 HNRNPA2B1P22626 353 aaKnown RBP15.99■□□□□ 0.15
NEK3-206ENST00000611833 KIR2DL3P43628 341 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 EVX1P49640 407 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 SLC16A1P53985 500 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 ARF3P61204 181 aaPredicted RBP15.99■□□□□ 0.15
NEK3-206ENST00000611833 RPS7P62081 194 aaKnown RBP15.99■□□□□ 0.15
NEK3-206ENST00000611833 P2RY14Q15391 338 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.99■□□□□ 0.15
NEK3-206ENST00000611833 EOGTQ5NDL2 527 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 VASNQ6EMK4 673 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 UBASH3BQ8TF42 649 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 PATE1Q8WXA2 126 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 IFT27Q9BW83 186 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 ENKD1Q9H0I2 346 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 FN3KQ9H479 309 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 LYRM4Q9HD34 91 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 PRDM9Q9NQV7 894 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 DUSP22Q9NRW4 184 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 BABAM2Q9NXR7 383 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 CLDND1Q9NY35 253 aa15.99■□□□□ 0.15
NEK3-206ENST00000611833 DAPL1A0PJW8 107 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 J3QRE1 110 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 BHLHE40O14503 412 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 RGS9O75916 674 aaPredicted RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 RCBTB2O95199 551 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 TRAPPC2P0DI81 140 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 TRAPPC2BP0DI82 140 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 SAGP10523 405 aaPredicted RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 RPS4Y1P22090 263 aaKnown RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 TCEA1P23193 301 aaKnown RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 CFL1P23528 166 aaKnown RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 FXYD6P3P58550 94 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 EXOSC7Q15024 291 aaKnown RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 ALG11Q2TAA5 492 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 PRPF38BQ5VTL8 546 aaKnown RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 KIAA1324Q6UXG2 1013 aaKnown RBP15.98■□□□□ 0.15
NEK3-206ENST00000611833 TMEM91Q6ZNR0 172 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 SNX18Q96RF0 628 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 KCNN2Q9H2S1 579 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 EVA1BQ9NVM1 165 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 KCNE5Q9UJ90 142 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 ADAM30Q9UKF2 790 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 SATB2Q9UPW6 733 aa15.98■□□□□ 0.15
NEK3-206ENST00000611833 A0A087WV62 115 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 CDHR4A6H8M9 788 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 FAM25AB3EWG3 89 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 FAM25CB3EWG5 89 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 FAM25GB3EWG6 89 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 GTPBP1O00178 669 aaKnown RBP15.97■□□□□ 0.15
NEK3-206ENST00000611833 ATP1B1P05026 303 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 PVRP15151 417 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 MAP2K3P46734 347 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 INPP1P49441 399 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 SRP54P61011 504 aaKnown RBP15.97■□□□□ 0.15
NEK3-206ENST00000611833 SHC2P98077 582 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 BDH1Q02338 343 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 DLX2Q07687 328 aaPredicted RBP15.97■□□□□ 0.15
NEK3-206ENST00000611833 PLET1Q6UQ28 207 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 TMEM99Q8N816 258 aa15.97■□□□□ 0.15
NEK3-206ENST00000611833 TMEM52Q8NDY8 209 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms