RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SULF2Q8IWU5 870 aa12.33□□□□□ -0.44
USP6NL-205ENST00000609104 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
USP6NL-205ENST00000609104 GIMAP1Q8WWP7 306 aa12.33□□□□□ -0.44
USP6NL-205ENST00000609104 VDAC3Q9Y277 283 aa12.33□□□□□ -0.44
USP6NL-205ENST00000609104 CD300LBA8K4G0 201 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 CXCR4P61073 352 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF546Q86UE3 836 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 UMODL1-AS1Q8N2C9 162 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TAS2R31P59538 309 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SERINC2Q96SA4 455 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 V9GY05 133 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 C2orf76Q3KRA6 126 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 IGSF21Q96ID5 467 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 DDX31Q9H8H2 851 aaKnown RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 MED6O75586 246 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 AFF3P51826 1226 aaKnown RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 FOXA1P55317 472 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SBSNQ6UWP8 590 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 VASH1Q7L8A9 365 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF808Q8N4W9 903 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SH3BGRL2Q9UJC5 107 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 F2P00734 622 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SERPINA2P20848 420 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 PTGER1P34995 402 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 DCTP40126 519 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 BDH1Q02338 343 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 CST9LP1Q5W188 147 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TP53INP2Q8IXH6 220 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 C12orf76Q8N812 135 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 OR9A4Q8NGU2 314 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SLC7A13Q8TCU3 470 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TMEM239Q8WW34 195 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 A0A1W2PS29 197 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SGK494L7N484 410 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SULT1B1O43704 296 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 LDB3O75112 727 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 RAB5CP51148 216 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 IL20RBQ6UXL0 311 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TECPR1Q7Z6L1 1165 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF417Q8TAU3 575 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 HHATLQ9HCP6 504 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TXNL4BQ9NX01 149 aaKnown RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SLX4IPQ5VYV7 408 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TERB2Q8NHR7 220 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF384Q8TF68 577 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 GLTPQ9NZD2 209 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 STYXL1Q9Y6J8 313 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF840PA6NDX5 716 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SPARTQ8N0X7 666 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TCEAL2Q9H3H9 227 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 KNDC1Q76NI1 1749 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 A0A1W2PPV4 95 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 EFCAB7A8K855 629 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 SCGB1D1O95968 90 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 HOXD12P35452 270 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 EIF4HQ15056 248 aaKnown RBP12.32□□□□□ -0.44
USP6NL-205ENST00000609104 GTDC1Q4AE62 458 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ZNF691Q5VV52 312 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 PLCXD3Q63HM9 321 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 TMEM25Q86YD3 366 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 ANKMY1Q9P2S6 941 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 RASD1Q9Y272 281 aa12.32□□□□□ -0.44
USP6NL-205ENST00000609104 KLHL33A6NCF5 533 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 CRHBPP24387 322 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 UBE2NLQ5JXB2 153 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 DCAF13Q9NV06 445 aaKnown RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 GPR19Q15760 415 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 TRMT2BQ96GJ1 504 aaKnown RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 SLC2A11Q9BYW1 496 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 SAP130Q9H0E3 1048 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 RETREG1Q9H6L5 497 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 NOX3Q9HBY0 568 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 A0A1B0GVG6 124 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 DPM1O60762 260 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 ZIC2O95409 532 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 GALNT1Q10472 559 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 RAB6CQ53S08 254 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 RAB6CQ9H0N0 254 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 PCYT1BQ9Y5K3 369 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 NAP1L6A6NFF2 107 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 FAM183AA6NL82 134 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 UBL4AP11441 157 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 ADARB1P78563 741 aaKnown RBP12.31□□□□□ -0.44
USP6NL-205ENST00000609104 BTN1A1Q13410 526 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 TBC1D20Q96BZ9 403 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 PRRT1Q99946 306 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 TRAV27A0A087WT01 109 aa12.31□□□□□ -0.44
USP6NL-205ENST00000609104 SHISA6Q6ZSJ9 500 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms