RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 EPS8Q12929 822 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 APOFQ13790 326 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 IQCCQ4KMZ1 466 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 LRRC23Q53EV4 343 aaPredicted RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 PRSS41Q7RTY9 318 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 MDGA2Q7Z553 956 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 ZDHHC21Q8IVQ6 265 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 PNPT1Q8TCS8 783 aaKnown RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 ZBED6CLQ96FA7 236 aaPredicted RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 LRRC46Q96FV0 321 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 ROGDIQ9GZN7 287 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 UTS2RQ9UKP6 389 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 FAF1Q9UNN5 650 aaPredicted RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 TRIM64A6NGJ6 449 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 TUBAL3A6NHL2 446 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 FAM166BA8MTA8 275 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 TMEM229AB2RXF0 380 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 FAM47E-STBD1D6RA91 191 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 SGK494L7N484 410 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ERI3O43414 337 aaKnown RBP11.73□□□□□ -0.53
SCAF1-202ENST00000595242 CDC123O75794 336 aaPredicted RBP11.73□□□□□ -0.53
SCAF1-202ENST00000595242 STATHP02808 62 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 SMIM10L1P0DMW3 83 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ETFAP13804 333 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 CAPGP40121 348 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 PPIAP62937 165 aaKnown RBP11.73□□□□□ -0.53
SCAF1-202ENST00000595242 RHAGQ02094 409 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 RGS1Q08116 209 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 CYBRD1Q53TN4 286 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 COX20Q5RI15 118 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 TMEM214Q6NUQ4 689 aaKnown RBP11.73□□□□□ -0.53
SCAF1-202ENST00000595242 TBPL2Q6SJ96 375 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 TMEM64Q6YI46 380 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ASPGQ86U10 573 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 HIPK1Q86Z02 1210 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ZDHHC13Q8IUH4 622 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 CYP4Z2PQ8N1L4 340 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 DHRSXQ8N5I4 330 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ACOT4Q8N9L9 421 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 PLPP5Q8NEB5 264 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 SFXN5Q8TD22 340 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 RNASE6Q93091 150 aaKnown RBP11.73□□□□□ -0.53
SCAF1-202ENST00000595242 TSLPQ969D9 159 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 NRBF2Q96F24 287 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 SMIM10Q96HG1 83 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 HSH2DQ96JZ2 352 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ZDHHC11Q9H8X9 412 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 A4GALTQ9NPC4 353 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 ADPRHL2Q9NX46 363 aa11.73□□□□□ -0.53
SCAF1-202ENST00000595242 DOCK7Q96N67 2140 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 NINQ8N4C6 2090 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 TRIM64BA6NI03 449 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 CLCA1A8K7I4 914 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 MYO1GB0I1T2 1018 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 G3V2T6 193 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 ACOT7O00154 380 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 PLOD2O00469 737 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 WDR1O75083 606 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 ZNF682O95780 498 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 FABP3P05413 133 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 LINGO3P0C6S8 592 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 THRBP10828 461 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 SOAT1P35610 550 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 CHI3L1P36222 383 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 CRATP43155 626 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 PLA2G16P53816 162 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 DSTNP60981 165 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 KCNJ10P78508 379 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 SCARB2Q14108 478 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 GK3PQ14409 553 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 KCTD21Q4G0X4 260 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 OR2T5Q6IEZ7 315 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 SLC48A1Q6P1K1 146 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 SHQ1Q6PI26 577 aaKnown RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 RNF130Q86XS8 419 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 CLEC4FQ8N1N0 589 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 METTL25Q8N6Q8 603 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 RELL2Q8NC24 303 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 OR2T29Q8NH02 315 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 MAGEE2Q8TD90 523 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 C7orf34Q96L11 122 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 RBM4BQ9BQ04 359 aaKnown RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 DOHHQ9BU89 302 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 RBM4Q9BWF3 364 aaKnown RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 RBCK1Q9BYM8 510 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 SLC35C2Q9NQQ7 365 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 DEPPQ9NTK1 212 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 THUMPD1Q9NXG2 353 aaKnown RBP11.72□□□□□ -0.53
SCAF1-202ENST00000595242 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 ANGPT4Q9Y264 503 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 PCDHGB5Q9Y5G0 923 aa11.72□□□□□ -0.53
SCAF1-202ENST00000595242 A0A1W2PR48 441 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 PINLYPA6NC86 204 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms