RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PATL1Q86TB9 770 aaKnown RBP15.24■□□□□ 0.03
COMMD4-224ENST00000568877 FAM71CQ8NEG0 241 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 DTNBP1Q96EV8 351 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 LAT2Q9GZY6 243 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 DEFB127Q9H1M4 99 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 TSPAN10Q9H1Z9 355 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-224ENST00000568877 PTGES2Q9H7Z7 377 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-224ENST00000568877 PACSIN3Q9UKS6 424 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 NPIPA1Q9UND3 350 aa15.24■□□□□ 0.03
COMMD4-224ENST00000568877 KALRNO60229 2985 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 M0QX08 132 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 GMFGO60234 142 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 BCAS1O75363 584 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 TRAPPC6AO75865 159 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 CYP7B1O75881 506 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 MFN2O95140 757 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 HPNP05981 417 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 CELA3AP09093 270 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 UBTFL6P0CB48 400 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 PRKAR1BP31321 381 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 P2RX1P51575 399 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 DSCR4P56555 118 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 EEF1A1P68104 462 aaKnown RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 SKP2Q13309 424 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 TOMM20Q15388 145 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 ZSWIM7Q19AV6 140 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 SPATS1Q496A3 300 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 CMPK2Q5EBM0 449 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 MRPL2Q5T653 305 aaKnown RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 RNF220Q5VTB9 566 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 ZNF836Q6ZNA1 936 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 ARMC8Q8IUR7 673 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 RNF148Q8N7C7 305 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 TNIP2Q8NFZ5 429 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 CNOT9Q92600 299 aaKnown RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 SLC7A6OSQ96CW6 309 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 C1GALT1C1Q96EU7 318 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 SLX1AQ9BQ83 275 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 ARMC7Q9H6L4 198 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 ACKR4Q9NPB9 350 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 SEC14L3Q9UDX4 400 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 CD300AQ9UGN4 299 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 ICAM5Q9UMF0 924 aa15.23■□□□□ 0.03
COMMD4-224ENST00000568877 MRPS18CQ9Y3D5 142 aaKnown RBP15.23■□□□□ 0.03
COMMD4-224ENST00000568877 CDHR4A6H8M9 788 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 ANKUB1A6NFN9 424 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 GSTA4O15217 222 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 GYG2O15488 501 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 ATP5HO75947 161 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 WISP2O76076 250 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 HSD17B1P14061 328 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 DPP4P27487 766 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 HTR1EP28566 365 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 SRD5A2P31213 254 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 KDELR2P33947 212 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 SUMO3P55854 103 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 PLAURQ03405 335 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 DMTNQ08495 405 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 GANABQ14697 944 aaKnown RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 KRTCAP3Q53RY4 240 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 DHRS4L2Q6PKH6 230 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 PRICKLE2Q7Z3G6 844 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 ARHGAP24Q8N264 748 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 CLIP4Q8N3C7 705 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 TMCO5AQ8N6Q1 288 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 FAM83FQ8NEG4 500 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 BHLHE22Q8NFJ8 381 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 TOR1AIP2Q8NFQ8 470 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 OR5W2Q8NH69 310 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 GPR137Q96N19 417 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 RSPO3Q9BXY4 272 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 EXOSC3Q9NQT5 275 aaKnown RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 RLIMQ9NVW2 624 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 DNAJB12Q9NXW2 375 aaKnown RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 DKKL1Q9UK85 242 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 PRPF19Q9UMS4 504 aaKnown RBP15.22■□□□□ 0.03
COMMD4-224ENST00000568877 CHST2Q9Y4C5 530 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 ZFYVE26Q68DK2 2539 aa15.22■□□□□ 0.03
COMMD4-224ENST00000568877 EBAG9O00559 213 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 CXCR6O00574 342 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 ZIC3O60481 467 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 TPST1O60507 370 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 CDC40O60508 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
COMMD4-224ENST00000568877 IGHG3P01860 377 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 OPN1SWP03999 348 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 TCN1P20061 433 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-224ENST00000568877 TDGF1P3P51864 188 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 CRYBA2P53672 197 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 CBFBQ13951 182 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 CEACAM7Q14002 265 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 DNAL1Q4LDG9 190 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 ARSKQ6UWY0 536 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 YRDCQ86U90 279 aaKnown RBP15.21■□□□□ 0.03
COMMD4-224ENST00000568877 GRAMD2AQ8IUY3 354 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 SMYD1Q8NB12 490 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 FAM156AQ8NDB6 213 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 SLC26A7Q8TE54 656 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 FIG4Q92562 907 aa15.21■□□□□ 0.03
COMMD4-224ENST00000568877 TAMM41Q96BW9 452 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms