RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ACTL6AO96019 429 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 NID1P14543 1247 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 GNLYP22749 145 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 DPP4P27487 766 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 PTGS2P35354 604 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 GFRA1P56159 465 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 DLX5P56178 289 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 PCBP3P57721 371 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 MTPNP58546 118 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 B3GALT5-AS1P59052 145 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 CDK6Q00534 326 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 PLAURQ03405 335 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF117Q03924 483 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 CRYZQ08257 329 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 SKP2Q13309 424 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 MRPL49Q13405 166 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 ELOAQ14241 798 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 SELPLGQ14242 412 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 CAPRIN1Q14444 709 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 KRT72Q14CN4 511 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC25A53Q5H9E4 307 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 GCNT6Q5T4J0 391 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 RNF220Q5VTB9 566 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 CBLN3Q6UW01 205 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 EIF3MQ7L2H7 374 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 OLIG3Q7RTU3 272 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 FITM2Q8N6M3 262 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 OR4K17Q8NGC6 315 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 B4GALNT2Q8NHY0 566 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 BBS10Q8TAM1 723 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 FAM57AQ8TBR7 257 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 PHOSPHO1Q8TCT1 267 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 BCAS4Q8TDM0 211 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC35B4Q969S0 331 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 RELTQ969Z4 430 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 SARAFQ96BY9 339 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 C1GALT1C1Q96EU7 318 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF583Q96ND8 569 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 TAS2R10Q9NYW0 307 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 IFT52Q9Y366 437 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 LIPGQ9Y5X9 500 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 GPC6Q9Y625 555 aaPredicted RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 RELNP78509 3460 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 FAAHO00519 579 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 NDUFAB1O14561 156 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 AIM2O14862 343 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 OIP5O43482 229 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CDC40O60508 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC19A2O60779 497 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 TRAPPC6AO75865 159 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 PDE9AO76083 593 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CSTAP01040 98 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 LINGO3P0C6S8 592 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 PABPC4LP0CB38 370 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 UBL4AP11441 157 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CPN1P15169 458 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 IL7RP16871 459 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 BMP7P18075 431 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 PSMA4P25789 261 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ADH6P28332 368 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CA7P43166 264 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 UQCRFS1P47985 274 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 EEF1A1P68104 462 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ART3Q13508 389 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 SCARB2Q14108 478 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 VEZF1Q14119 521 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 BCL2A1Q16548 175 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 VMACQ2NL98 169 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 PLPPR5Q32ZL2 321 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 EIPR1Q53HC9 387 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 RABL3Q5HYI8 236 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 EMC4Q5J8M3 183 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 WIPI1Q5MNZ9 446 aaPredicted RBP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ERICH5Q6P6B1 374 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CCDC80Q76M96 950 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 IFNEQ86WN2 208 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC15A3Q8IY34 581 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ZZZ3Q8IYH5 903 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 GATSQ8NAP1 163 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 C11orf65Q8NCR3 313 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 HIPK4Q8NE63 616 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 BHLHE22Q8NFJ8 381 aaPredicted RBP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 OR52P1PQ8NH57 321 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 OR5W2Q8NH69 310 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 OR10A6Q8NH74 314 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 GPR119Q8TDV5 335 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 WDR60Q8WVS4 1066 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 MAL2Q969L2 176 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 TIMP4Q99727 224 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ECSITQ9BQ95 431 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC39A3Q9BRY0 314 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 QRSL1Q9H0R6 528 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC6A15Q9H2J7 730 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 LDAHQ9H6V9 325 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 EVA1AQ9H8M9 152 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ARL8BQ9NVJ2 186 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 SPRR3Q9UBC9 169 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 ABCD2Q9UBJ2 740 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 TAGLN3Q9UI15 199 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms