RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PIP5K1CO60331 668 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 FAM20BO75063 409 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ADRA2AP08913 450 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 JMJD7P0C870 316 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 POU1F1P28069 291 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 RFX3P48380 749 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 NUDT6P53370 316 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 MC2RQ01718 297 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ELAVL1Q15717 326 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF385CQ66K41 422 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PRSS48Q7RTY5 328 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 CLVS1Q8IUQ0 354 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF540Q8NDQ6 660 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 OR8D4Q8NGM9 314 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 FAM46AQ96IP4 442 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 YIPF2Q9BWQ6 316 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 POLR2J2Q9GZM3 115 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 DSN1Q9H410 356 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 Q9N2J8 555 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PNO1Q9NRX1 252 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PTTG2Q9NZH5 202 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 CNIH4Q9P003 139 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 TESQ9UGI8 421 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF223Q9UK11 482 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 CBLCQ9ULV8 474 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 SLC7A7Q9UM01 511 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 SRPK3Q9UPE1 567 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ASPMQ8IZT6 3477 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PIEZO1Q92508 2521 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 CCDC187A0A096LP49 1063 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 A0A1W2PNU3 283 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TRAPPC13A5PLN9 417 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TTC36A6NLP5 189 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 PLD2O14939 933 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 INMTO95050 263 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 FGF5P12034 268 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TTKP33981 857 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 MAP2K4P45985 399 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 CDC42P60953 191 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
SMAD3-207ENST00000558763 EFNB1P98172 346 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 MVKQ03426 396 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TSPAN31Q12999 210 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 FGFBP1Q14512 234 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 IL11RAQ14626 422 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 OR1Q1Q15612 314 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 MBOAT2Q6ZWT7 520 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 AHSA2Q719I0 299 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 MRGPREQ86SM8 312 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 RANBP3LQ86VV4 465 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-207ENST00000558763 NRMQ8IXM6 262 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 AMER2Q8N7J2 671 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TOR1AIP2Q8NFQ8 470 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 IPCEF1Q8WWN9 437 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-207ENST00000558763 GGHQ92820 318 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 ADIPOR1Q96A54 375 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 CLIP3Q96DZ5 547 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 TGIF2Q9GZN2 237 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 CACYBPQ9HB71 228 aaKnown RBP11.93□□□□□ -0.5
SMAD3-207ENST00000558763 AMBNQ9NP70 447 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 MKKSQ9NPJ1 570 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-207ENST00000558763 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 DLL3Q9NYJ7 618 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 FLRT3Q9NZU0 649 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 PRODH2Q9UF12 536 aa11.93□□□□□ -0.5
SMAD3-207ENST00000558763 CCDC160A6NGH7 325 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 A8MUA0 341 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 B4E171 279 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 RGS10O43665 173 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 MRPS14O60783 128 aaKnown RBP11.92□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF28P17035 718 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 TNNI3P19429 210 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 FPR3P25089 353 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 TSPAN7P41732 249 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 SLC15A1P46059 708 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 CSNK2BP67870 215 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 CDK5Q00535 292 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 FNDC7Q5VTL7 733 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF730Q6ZMV8 503 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 LANCL3Q6ZV70 420 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 P3H2Q8IVL5 708 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 ALDH16A1Q8IZ83 802 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 OR4C3Q8NH37 302 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 MESP1Q9BRJ9 268 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 NUDT9Q9BW91 350 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 NXF5Q9H1B4 397 aaKnown RBP11.92□□□□□ -0.5
SMAD3-207ENST00000558763 EGLN3Q9H6Z9 239 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 LIN28AQ9H9Z2 209 aaKnown RBP11.92□□□□□ -0.5
SMAD3-207ENST00000558763 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 FBXO8Q9NRD0 319 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
SMAD3-207ENST00000558763 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms