RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CCL19Q99731 98 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 PKP2Q99959 881 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 MGME1Q9BQP7 344 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 NUP85Q9BW27 656 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 RAB34Q9BZG1 259 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 RTN4RQ9BZR6 473 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 CHMP1AQ9HD42 196 aaPredicted RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 SCRT2Q9NQ03 307 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 GPATCH2LQ9NWQ4 482 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 PCYT1BQ9Y5K3 369 aaPredicted RBP5.03□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD12Q6UB98 2062 aa5.03□□□□□ -1.6
RTF1-204ENST00000558117 CCDC88CQ9P219 2028 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 PRSS51A0A1B0GVH4 220 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 TSPAN11A1L157 253 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 RGSL1A5PLK6 1076 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 K7EPI3 171 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 TCF21O43680 179 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 GPR137BO60478 399 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 BCAS2O75934 225 aaPredicted RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 ADCY5O95622 1261 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 ASS1P00966 412 aaKnown RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 TSHBP01222 138 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 IGLV3-25P01717 112 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 NR3C1P04150 777 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 ACP2P11117 423 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 F3P13726 295 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 PSMA5P28066 241 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 RAB28P51157 221 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 CYP24A1Q07973 514 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 MELKQ14680 651 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 SNRNP35Q16560 246 aaKnown RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 HFEQ30201 348 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 TOR1AIP1Q5JTV8 583 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 VAX1Q5SQQ9 334 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 GCNT6Q5T4J0 391 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 ARHGAP17Q68EM7 881 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 SPOPLQ6IQ16 392 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 KLC3Q6P597 504 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 BLOC1S2Q6QNY1 142 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 ADCK2Q7Z695 626 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 LDB1Q86U70 411 aaPredicted RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 RTL3Q8N8U3 475 aaKnown RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 ATP6V0D2Q8N8Y2 350 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 IQUBQ8NA54 791 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 CAMKVQ8NCB2 501 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 OR1L3Q8NH93 324 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 SLC22A8Q8TCC7 542 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 IRGQQ8WZA9 623 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 DAZLQ92904 295 aaKnown RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 TRIM44Q96DX7 344 aaPredicted RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 ZNF274Q96GC6 653 aaPredicted RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 C17orf62Q9BQA9 187 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 KCNK15Q9H427 330 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 SAMSN1Q9NSI8 373 aaKnown RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 ANO10Q9NW15 660 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 TAS2R3Q9NYW6 316 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 NINJ2Q9NZG7 142 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 ACTR3BQ9P1U1 418 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 IL19Q9UHD0 177 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 HOOK1Q9UJC3 728 aaKnown RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 LEF1Q9UJU2 399 aaPredicted RBP5.02□□□□□ -1.61
RTF1-204ENST00000558117 VANGL2Q9ULK5 521 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 KCNK7Q9Y2U2 307 aa5.02□□□□□ -1.61
RTF1-204ENST00000558117 DNAJC13O75165 2243 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SYNJ2BP-COX16A0A087WUM0 186 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 A0A1B0GTH9 108 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 OR5H15A6NDH6 313 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 TUBAL3A6NHL2 446 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 DUXAA6NLW8 204 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 OR5K4A6NMS3 321 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 PCDH7O60245 1069 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 GPRIN2O60269 458 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 CTDNEP1O95476 244 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 XRCC1P18887 633 aaPredicted RBP5.01□□□□□ -1.61
RTF1-204ENST00000558117 EPHA2P29317 976 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 PRKCIP41743 596 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 CASP4P49662 377 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SLC26A5P58743 744 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SNRPD1P62314 119 aaKnown RBP5.01□□□□□ -1.61
RTF1-204ENST00000558117 ACKR1Q16570 336 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 CLEC12BQ2HXU8 276 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SGSM1Q2NKQ1 1148 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SYPL2Q5VXT5 272 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 DOK6Q6PKX4 331 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SETD3Q86TU7 594 aaPredicted RBP5.01□□□□□ -1.61
RTF1-204ENST00000558117 HOOK3Q86VS8 718 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 SLC13A5Q86YT5 568 aaPredicted RBP5.01□□□□□ -1.61
RTF1-204ENST00000558117 L3MBTL4Q8NA19 623 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 OR11G2Q8NGC1 345 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 LINC01560Q8TB33 94 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 WDR20Q8TBZ3 569 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 HCAR2Q8TDS4 363 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 F2RL3Q96RI0 385 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 CDRT15Q96T59 188 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 FERMT1Q9BQL6 677 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 FGFBP2Q9BYJ0 223 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 HSD3B7Q9H2F3 369 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 HHATLQ9HCP6 504 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 ZNF701Q9NV72 531 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms