RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PLEKHM1Q9Y4G2 1056 aa10.6□□□□□ -0.71
SRP54-213ENST00000556994 TRPM6Q9BX84 2022 aa10.6□□□□□ -0.71
SRP54-213ENST00000556994 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 A0A0G2JK05 382 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 C7orf66A4D0T2 115 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 TOXO94900 526 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 MT-ND4P03905 459 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 RAF1P04049 648 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ANKRD34CP0C6C1 535 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ANXA3P12429 323 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 F3P13726 295 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 SNRPBP14678 240 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 DRD5P21918 477 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 NOS3P29474 1203 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 NUDT1P36639 197 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 P2RY2P41231 377 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 HCCSP53701 268 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 TCEA2Q15560 299 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 PUS10Q3MIT2 529 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 PLPP4Q5VZY2 271 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 CDC73Q6P1J9 531 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 SLC48A1Q6P1K1 146 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ZNF782Q6ZMW2 699 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 WDR88Q6ZMY6 472 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 FRRS1Q6ZNA5 592 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 GRASPQ7Z6J2 395 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 OR4N5Q8IXE1 308 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 IZUMO1Q8IYV9 350 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 FBXL6Q8N531 539 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 CYB561A3Q8NBI2 242 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 PTP4A1Q93096 173 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 GIMAP5Q96F15 307 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ORAI3Q9BRQ5 295 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 CACNG6Q9BXT2 260 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 RANBP3Q9H6Z4 567 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 HEXA-AS1Q9H8Q6 139 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 MRPS30Q9NP92 439 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 MRPL15Q9P015 296 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 KCNK6Q9Y257 313 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ZNF443Q9Y2A4 671 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 TMEM5Q9Y2B1 443 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 A0A1W2PRG6 482 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 OTOL1A6NHN0 477 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 UNC119BA6NIH7 251 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 I3L521 148 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 NFATC1O95644 943 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ACRP10323 421 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 PRKAR1BP31321 381 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 HSD17B2P37059 387 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 AP2S1P53680 142 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 GALEQ14376 348 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 GPR68Q15743 365 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ST3GAL2Q16842 350 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 HNRNPA1L2Q32P51 320 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 LGALSLQ3ZCW2 172 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 PRPF38BQ5VTL8 546 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 MRM1Q6IN84 353 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 THSD4Q6ZMP0 1018 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ZNF836Q6ZNA1 936 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 GJD3Q8N144 294 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 OR7G2Q8NG99 324 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 FANK1Q8TC84 345 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 KISS1RQ969F8 398 aaPredicted RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 YIPF5Q969M3 257 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ACTRT3Q9BYD9 372 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 ANKRD19PQ9H560 264 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 SLC6A20Q9NP91 592 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 MBNL1Q9NR56 388 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 NKIRAS2Q9NYR9 191 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 APOBEC3BQ9UH17 382 aaKnown RBP10.59□□□□□ -0.71
SRP54-213ENST00000556994 ZMIZ1Q9ULJ6 1067 aa10.59□□□□□ -0.71
SRP54-213ENST00000556994 NPIPA5A0A0B4J1W7 369 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 SHOXO15266 292 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PDGFAP04085 211 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 IL9P15248 144 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 F8A1P23610 371 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 VIPR2P41587 438 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZNF81P51508 661 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 RGS1Q08116 209 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 KRT33BQ14525 404 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZIC1Q15915 447 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZSWIM7Q19AV6 140 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ACSM3Q53FZ2 586 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PYHIN1Q6K0P9 492 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 GLRX5Q86SX6 157 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 GID4Q8IVV7 300 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 TMIEQ8NEW7 156 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 AHCYL2Q96HN2 611 aaKnown RBP10.58□□□□□ -0.72
SRP54-213ENST00000556994 TEAD3Q99594 435 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PRSS27Q9BQR3 290 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 GSDMCQ9BYG8 508 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 CCDC86Q9H6F5 360 aaKnown RBP10.58□□□□□ -0.72
SRP54-213ENST00000556994 EMC7Q9NPA0 242 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 DIABLOQ9NR28 239 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 SIDT1Q9NXL6 827 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms