RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 OR52B4Q8NGK2 314 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 OR8J1Q8NGP2 316 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 HUS1BQ8NHY5 278 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 CXorf40AQ8TE69 158 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 RIT1Q92963 219 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 POP5Q969H6 163 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 GLYATL1Q969I3 302 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TMEM159Q96B96 161 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TMIGD2Q96BF3 282 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 RHBDF1Q96CC6 855 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 AP2M1Q96CW1 435 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 C16orf58Q96GQ5 468 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 METTL2AQ96IZ6 378 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 SMIM14Q96QK8 99 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 HOPXQ9BPY8 73 aaPredicted RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 EGLN1Q9GZT9 426 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ATG10Q9H0Y0 220 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 EBF3Q9H4W6 596 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 WDR41Q9HAD4 459 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 EBF2Q9HAK2 575 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 GAR1Q9NY12 217 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 THAP10Q9P2Z0 257 aaPredicted RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 VPS4AQ9UN37 437 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 AP3M1Q9Y2T2 418 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 DNAJC15Q9Y5T4 150 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 GMEB1Q9Y692 573 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 MAU2Q9Y6X3 613 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 PLXNA2O75051 1894 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 C2orf16Q68DN1 1984 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 PLXNB3Q9ULL4 1909 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 A0A075B6Q4 140 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 A0A0U1RQS6 177 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 MAGEA13PA6NCF6 341 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 OR6C68A6NDL8 312 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CBY3A6NI87 242 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 IQCF5A8MTL0 148 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 A8MX80 341 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 GFYI3L273 518 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 K7EQM0 130 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 UBFD1O14562 309 aaKnown RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 MRASO14807 208 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 NVLO15381 856 aaKnown RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 TMPRSS11DO60235 418 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 B4GALT2O60909 372 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 OR4F21O95013 312 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CLDN9O95484 217 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 HIST1H2ABP04908 130 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 S100A6P06703 90 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CTSLP07711 333 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 ADRB3P13945 408 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 SLC2A4P14672 509 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 HOXB9P17482 250 aaPredicted RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 ITGB6P18564 788 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 GPX3P22352 226 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 PRKACBP22694 351 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 ME2P23368 584 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 GSTM2P28161 218 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 TEAD1P28347 426 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 SLC6A6P31641 620 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CCR7P32248 378 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 VHLP40337 213 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 GPR1P46091 355 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 PSMD8P48556 350 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 PRLHRP49683 370 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 GPR143P51810 404 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 HNRNPKP61978 463 aaKnown RBP eCLIP4.74□□□□□ -1.65
SRP54-211ENST00000556445 ABATP80404 500 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 EMX2Q04743 252 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 SLC34A1Q06495 639 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 HSPA14Q0VDF9 509 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 ZNF234Q14588 700 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 KPNB1Q14974 876 aaKnown RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 IMPG1Q17R60 797 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 BCL7AQ4VC05 210 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 LBHQ53QV2 105 aaPredicted RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 AWAT1Q58HT5 328 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 TMEM41BQ5BJD5 291 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CMPK2Q5EBM0 449 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 ACSBG2Q5FVE4 666 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 XKR7Q5GH72 579 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 SAMD4BQ5PRF9 694 aaKnown RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.74□□□□□ -1.65
SRP54-211ENST00000556445 C9orf64Q5T6V5 341 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 WLSQ5T9L3 541 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 AP1ARQ63HQ0 302 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CLEC6AQ6EIG7 209 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 VITQ6UXI7 678 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 DLEU7Q6UYE1 221 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 HIST3H2AQ7L7L0 130 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 TRMT11Q7Z4G4 463 aaKnown RBP4.74□□□□□ -1.65
SRP54-211ENST00000556445 GOLGA7Q7Z5G4 137 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 HSD11B1LQ7Z5J1 315 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 DSELQ8IZU8 1212 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CLDN19Q8N6F1 224 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 RNF148Q8N7C7 305 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 SCAIQ8N9R8 606 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 CATSPER1Q8NEC5 780 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 OR52J3Q8NH60 311 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 GDPD5Q8WTR4 605 aa4.74□□□□□ -1.65
SRP54-211ENST00000556445 SKA2Q8WVK7 121 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms