RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TRIM36Q9NQ86 728 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 KCMF1Q9P0J7 381 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 HCN3Q9P1Z3 774 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 DENND4AQ7Z401 1863 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 A0A1B0GUH1 482 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 C2orf92A0A1B0GVN3 265 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 A8MXK9 166 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 LRRTM2O43300 516 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 SSNA1O43805 119 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 KCNJ13O60928 360 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 B3GALNT1O75752 331 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 TBX6O95947 436 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 CPN1P15169 458 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 PRKACAP17612 351 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 GIFP27352 417 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 CD79BP40259 229 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 ARFIP1P53367 373 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 FAM78AQ5JUQ0 283 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 PIP5KL1Q5T9C9 394 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 HSD17B13Q7Z5P4 300 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 NAXDQ8IW45 347 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 FTMTQ8N4E7 242 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 EID2Q8N6I1 236 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 OR6C4Q8NGE1 309 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 OR2T35Q8NGX2 323 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 ASB16Q96NS5 453 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 ABHD1Q96SE0 405 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 GPA33Q99795 319 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 TEX101Q9BY14 249 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 FN3KQ9H479 309 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 PRSS16Q9NQE7 514 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 SIRT3Q9NTG7 399 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 BABAM2Q9NXR7 383 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 H2AFY2Q9P0M6 372 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 CXXC1Q9P0U4 656 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 THAP10Q9P2Z0 257 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 SLC23A2Q9UGH3 650 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 PFDN2Q9UHV9 154 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 CAMK2AQ9UQM7 478 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 TMEM5Q9Y2B1 443 aa9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-210ENST00000555252 LOC105369274A0A096LPK9 316 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 LINC01553A4QN01 128 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 TBC1D3BA6NDS4 549 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 G3V3Q6 166 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 ZNF593O00488 134 aaPredicted RBP9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 ZNF749O43361 778 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 PLPP2O43688 288 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 PCCBP05166 539 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 GIPP09681 153 aaPredicted RBP9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 TYRP1P17643 537 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 FPR3P25089 353 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 KHKP50053 298 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 FOXD4Q12950 439 aaPredicted RBP9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 ELFN2Q5R3F8 820 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 TMEM240Q5SV17 173 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 NR2C2APQ86WQ0 139 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 KLBQ86Z14 1044 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 SIAH3Q8IW03 269 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 OR4N4Q8N0Y3 316 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 MMP21Q8N119 569 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 C2orf73Q8N5S3 287 aaPredicted RBP9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 ACBD7Q8N6N7 88 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 ZBTB44Q8NCP5 570 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 OR5T2Q8NGG2 359 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 OR8D4Q8NGM9 314 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 SUN3Q8TAQ9 357 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 PIGXQ8TBF5 258 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 TRMT10AQ8TBZ6 339 aaKnown RBP9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 SLC35G5Q96KT7 338 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 MENTQ9BUN1 341 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 IFT27Q9BW83 186 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 EGLN3Q9H6Z9 239 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 PLEKHA1Q9HB21 404 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 SLAMF7Q9NQ25 335 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 BAIAP2Q9UQB8 552 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 RASD1Q9Y272 281 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 PRKAB1Q9Y478 270 aa9.96□□□□□ -0.81
MTHFD1-210ENST00000555252 LRRK1Q38SD2 2015 aa9.96□□□□□ -0.82
MTHFD1-210ENST00000555252 A0A087WUU8 490 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 A0A0G2JPF8 293 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 A0A1W2PPV9 198 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 HNRNPCL2B2RXH8 293 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 HNRNPCL3B7ZW38 293 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 M0R3H8 397 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 RTCAO00442 366 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR1F1O43749 312 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 STX11O75558 287 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 APOL3O95236 402 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ECDO95905 644 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 CFDP00746 253 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 HNRNPCL4P0DMR1 293 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 NR2F1P10589 423 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ICAM2P13598 275 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 BLVRAP53004 296 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 RAP2BP61225 183 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 MESP2Q0VG99 397 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ST3GAL3Q11203 375 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms