RNA–Protein interactions for RNA: ENST00000553758.1

AF111169.2-201, humanhuman

TSL 3 BASIC

Gene AF111169.2, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.2-201ENST00000553758 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 PRSS53Q2L4Q9 553 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 MST1LQ2TV78 715 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 KLHL17Q6TDP4 642 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 SSX8Q7RTT4 187 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 PTGR2Q8N8N7 351 aaPredicted RBP11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 LINC01356Q8N9X3 169 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 OR4F6Q8NGB9 312 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 PIK3R3Q92569 461 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 ANKZF1Q9H8Y5 726 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 MYNNQ9NPC7 610 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 SLC35C2Q9NQQ7 365 aa11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 MRTO4Q9UKD2 239 aaKnown RBP11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 TNPO3Q9Y5L0 923 aaKnown RBP11.19□□□□□ -0.62
AF111169.2-201ENST00000553758 NPIPA5A0A0B4J1W7 369 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 NPIPA7E9PJI5 369 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 UPK1AO00322 258 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 TMPRSS2O15393 492 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 OXSR1O95747 527 aaPredicted RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 JUNP05412 331 aaKnown RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 LINGO3P0C6S8 592 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 NPIPA8P0DM63 369 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 APEX1P27695 318 aaKnown RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 CRABP2P29373 138 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 PHC1P78364 1004 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 RAE1P78406 368 aaKnown RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 ZSWIM7Q19AV6 140 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 GGTA1PQ4G0N0 100 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 ARL13AQ5H913 290 aaPredicted RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 RPS27LQ71UM5 84 aaKnown RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 CTAGE3PQ8IX95 158 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 SAMD14Q8IZD0 417 aaPredicted RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 OR4C3Q8NH37 302 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 PHF21BQ96EK2 531 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 OSBPL9Q96SU4 736 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 LMF2Q9BU23 707 aaKnown RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 BRF2Q9HAW0 419 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 DMGDHQ9UI17 866 aaKnown RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 MCM8Q9UJA3 840 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 PCTPQ9UKL6 214 aa11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 C19orf53Q9UNZ5 99 aaPredicted RBP11.18□□□□□ -0.62
AF111169.2-201ENST00000553758 A0A087WV62 115 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ATP6V1G2-DDX39BF2Z307 99 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 PPP6CO00743 305 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 RGS14O43566 566 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 PCDH7O60245 1069 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 GABRA3P34903 492 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 MPIP34949 423 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 PRIM2P49643 509 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 NCBP2P52298 156 aaKnown RBP eCLIP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 CDH15P55291 814 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 RASGEF1BQ0VAM2 473 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ZNHIT3Q15649 155 aaPredicted RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 TMEM176BQ3YBM2 270 aaPredicted RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 MIDNQ504T8 468 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 AWAT1Q58HT5 328 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 TCHHL1Q5QJ38 904 aaPredicted RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 GRTP1Q5TC63 336 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 LETMD1Q6P1Q0 360 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ZAR1Q86SH2 424 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 PEG10Q86TG7 708 aaKnown RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 OR2L13Q8N349 312 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 SLC43A2Q8N370 569 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ZNF540Q8NDQ6 660 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ZFP90Q8TF47 636 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 PYROXD1Q8WU10 500 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ZNF75CPQ92670 426 aaPredicted RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 SNX18Q96RF0 628 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 BBS4Q96RK4 519 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 VRK1Q99986 396 aaPredicted RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 ZNF696Q9H7X3 374 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 MYOZ1Q9NP98 299 aaPredicted RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 DDX18Q9NVP1 670 aaKnown RBP11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 NTMQ9P121 344 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 JRKLQ9Y4A0 524 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 PCDHGB1Q9Y5G3 927 aa11.17□□□□□ -0.62
AF111169.2-201ENST00000553758 A0A1W2PNR3 127 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 CIB4A0PJX0 185 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 MYO1GB0I1T2 1018 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 LILRA1O75019 489 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 KCNH1O95259 989 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 C2P06681 752 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 CHN1P15882 459 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 TSPAN8P19075 237 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 ELK4P28324 431 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 CHN2P52757 468 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 FOXG1P55316 489 aaPredicted RBP11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 SNRPD2P62316 118 aaKnown RBP11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 SLC29A2Q14542 456 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 MLC1Q15049 377 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 CD226Q15762 336 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 FAM83EQ2M2I3 478 aa11.16□□□□□ -0.62
AF111169.2-201ENST00000553758 GLE1Q53GS7 698 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms