RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 BCAS2O75934 225 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CLDN9O95484 217 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 GFAPP14136 432 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF17P17021 662 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 PI3P19957 117 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 DEKP35659 375 aaKnown RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CASP9P55211 416 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 DR1Q01658 176 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 FAPQ12884 760 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 STX5Q13190 355 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 TAB1Q15750 504 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 PFKFB4Q16877 469 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 GLYR1Q49A26 553 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 GGTA1PQ4G0N0 100 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 METTL2BQ6P1Q9 378 aaKnown RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 TFAP2EQ6VUC0 442 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CYS1Q717R9 158 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 GALNT10Q86SR1 603 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 TBC1D1Q86TI0 1168 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CELF2-AS1Q8N7Q2 184 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 OR7G2Q8NG99 324 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 OR9A2Q8NGT5 310 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 OR10D3Q8NH80 312 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 UHMK1Q8TAS1 419 aaKnown RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 ROBO4Q8WZ75 1007 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CDKL2Q92772 493 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 KAT2AQ92830 837 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 GPR78Q96P69 363 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 HBEGFQ99075 208 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 NPAS1Q99742 590 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 NTMT1Q9BV86 223 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 AMBRA1Q9C0C7 1298 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 NOL11Q9H8H0 719 aaKnown RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 BARX1Q9HBU1 254 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 FARSBQ9NSD9 589 aaKnown RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 FAM120CQ9NX05 1096 aaKnown RBP6.46□□□□□ -1.38
ATXN3-219ENST00000553488 TXNDC16Q9P2K2 825 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 PCTPQ9UKL6 214 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 UTS2RQ9UKP6 389 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 DPRXA6NFQ7 191 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 SHISA9B4DS77 424 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 ADAMDEC1O15204 470 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 PLOD3O60568 738 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 GUCY1B2O75343 617 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 PSMG1O95456 288 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 PLGP00747 810 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TUBBP07437 444 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 IGFBP5P24593 272 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 PSMA4P25789 261 aaKnown RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 CRABP2P29373 138 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 SPRP35270 261 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 KRT20P35900 424 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 ALDH9A1P49189 494 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 CTBP2P56545 445 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TRA2BP62995 288 aaKnown RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 MRPS22P82650 360 aaKnown RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 BSPH1Q075Z2 132 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 LOXL1Q08397 574 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TSC22D1Q15714 1073 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TECRLQ5HYJ1 363 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 GRTP1Q5TC63 336 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 C11orf71Q6IPW1 123 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 MFSD12Q6NUT3 480 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 APOOLQ6UXV4 268 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 RAPH1Q70E73 1250 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 SLC44A2Q8IWA5 706 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 LRRC8AQ8IWT6 810 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 KLHL7Q8IXQ5 586 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF619Q8N2I2 560 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 ARIH2OSQ8N7S6 290 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 STEAP2Q8NFT2 490 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 RNF128Q8TEB7 428 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 PYROXD1Q8WU10 500 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 HS6ST2Q96MM7 605 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TNFRSF13CQ96RJ3 184 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TACO1Q9BSH4 297 aaKnown RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 POTEKPQ9BYX7 375 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 TRIM31Q9BZY9 425 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 ESRP2Q9H6T0 727 aaKnown RBP6.45□□□□□ -1.38
ATXN3-219ENST00000553488 PTGES2Q9H7Z7 377 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 FANCFQ9NPI8 374 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 GLRX2Q9NS18 164 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 AHSPQ9NZD4 102 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 LPAR3Q9UBY5 353 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 SLC12A4Q9UP95 1085 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 B3GALT5Q9Y2C3 310 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF780BQ9Y6R6 833 aa6.45□□□□□ -1.38
ATXN3-219ENST00000553488 GOLGA8QA0A0J9YX86 632 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ZC3H12DA2A288 527 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 FAM234BA2RU67 622 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 GOLGA8OA6NCC3 632 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 GOLGA8NF8WBI6 632 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 GOLGA8RI6L899 631 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 EIF3HO15372 352 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 CXCL13O43927 109 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 SSX4O60224 188 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 RAMP1O60894 148 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 KLHL2O95198 593 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms