RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PRRG3Q9BZD7 231 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 DPH1Q9BZG8 443 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 OR52D1Q9H346 318 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM27Q9HBJ8 222 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 PLGRKTQ9HBL7 147 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 KRCC1Q9NPI7 259 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 ATP13A2Q9NQ11 1180 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 FSCN3Q9NQT6 498 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 PNO1Q9NRX1 252 aaKnown RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 C20orf141Q9NUB4 165 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 MRPS18AQ9NVS2 196 aaKnown RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 PRODH2Q9UF12 536 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 CLEC2DQ9UHP7 191 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 PILRBQ9UKJ0 227 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 ATXN7L1Q9ULK2 861 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 A0A1B0GVG6 124 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 A0A1B0GX78 115 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 TCRBV16S1A1N1A0A5B0 115 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SURF4O15260 269 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 AIREO43918 545 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 RFPL3O75679 317 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 RAB36O95755 333 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 DDAH2O95865 285 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 IGKV3-11P04433 115 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 CKMT1AP12532 417 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 PNLIPP16233 465 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 FUT1P19526 365 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 ALAS2P22557 587 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 UGT2B10P36537 528 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 LIMK1P53667 647 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 CTBP2P56545 445 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SLC37A1P57057 533 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 MED22Q15528 200 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SSX1Q16384 188 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 MOGQ16653 247 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 TSTQ16762 297 aaKnown RBP10.61□□□□□ -0.71
RAB5C-208ENST00000551338 ZSWIM7Q19AV6 140 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 NDUFAF6Q330K2 333 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 PLK5Q496M5 336 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 ARHGAP40Q5TG30 622 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 FNDC7Q5VTL7 733 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 GUSBP11Q6P575 273 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 C19orf48Q6RUI8 117 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 PAQR6Q6TCH4 344 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF550Q7Z398 422 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM151BQ8IW70 566 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 CMIPQ8IY22 773 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 GPR135Q8IZ08 494 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 NANOGP1Q8N7R0 232 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 GRHL3Q8TE85 626 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SAP25Q8TEE9 199 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 LGALS12Q96DT0 336 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SENP5Q96HI0 755 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-208ENST00000551338 MGLLQ99685 303 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 G6PC3Q9BUM1 346 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF426Q9BUY5 554 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 TAPBPLQ9BX59 468 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 TRIM2Q9C040 744 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 OR51E2Q9H255 320 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 HHATLQ9HCP6 504 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF304Q9HCX3 659 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 FGF20Q9NP95 211 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-208ENST00000551338 MEPEQ9NQ76 525 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-208ENST00000551338 MED17Q9NVC6 651 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SUSD2Q9UGT4 822 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 DIMT1Q9UNQ2 313 aaKnown RBP10.61□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM5Q9Y2B1 443 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 GPR52Q9Y2T5 361 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 MED31Q9Y3C7 131 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 OR10H1Q9Y4A9 318 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 PMF1-BGLAPU3KQ54 211 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 PCNX3Q9H6A9 2034 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 SZT2Q5T011 3432 aa10.61□□□□□ -0.71
RAB5C-208ENST00000551338 CABIN1Q9Y6J0 2220 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 A0A1W2PQM1 296 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SERINC4A6NH21 518 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 M0R3G1 203 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 KPNA4O00629 521 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 PRKNO60260 465 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 CH25HO95992 272 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 RPLP0P05388 317 aaKnown RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 HBQ1P09105 142 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 TBXA2RP21731 343 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 OPRL1P41146 370 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 RGS6P49758 472 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 CLK1P49759 484 aaKnown RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SQSTM1Q13501 440 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 NR0B2Q15466 257 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 ELAVL1Q15717 326 aaKnown RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 VWA2Q5GFL6 755 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 C1orf189Q5VU69 101 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 AADACL4Q5VUY2 407 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 PEAR1Q5VY43 1037 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM71Q6P5X7 295 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 KIRREL2Q6UWL6 708 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 LINC00114Q6XXX2 140 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF574Q6ZN55 896 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 TMPRSS11FQ6ZWK6 438 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 COX15Q7KZN9 410 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms