RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PRKCDQ05655 676 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 FOXD4Q12950 439 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-215ENST00000547672 NADK2Q4G0N4 442 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 TMEM205Q6UW68 189 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 KCTD8Q6ZWB6 473 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 PRSS48Q7RTY5 328 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 SATL1Q86VE3 508 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 ENTHD1Q8IYW4 607 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 OR4N2Q8NGD1 307 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 RNF217Q8TC41 542 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 CNOT9Q92600 299 aaKnown RBP12.39□□□□□ -0.43
PTCH1-215ENST00000547672 TAAR9Q96RI9 348 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 GAL3ST4Q96RP7 486 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 WFDC6Q9BQY6 131 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 SLC19A3Q9BZV2 496 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 NDEL1Q9GZM8 345 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 LAT2Q9GZY6 243 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 NXF5Q9H1B4 397 aaKnown RBP12.39□□□□□ -0.43
PTCH1-215ENST00000547672 SLC25A19Q9HC21 320 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 MED17Q9NVC6 651 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
PTCH1-215ENST00000547672 CNOT2Q9NZN8 540 aaKnown RBP12.39□□□□□ -0.43
PTCH1-215ENST00000547672 RNF6Q9Y252 685 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 PCDHGB6Q9Y5F9 930 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 R4GN57 208 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 ADAMTS20P59510 1910 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 CCDC160A6NGH7 325 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 OR6C70A6NIJ9 312 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CLCA1A8K7I4 914 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 ZNF264O43296 627 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 FRS3O43559 492 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 RFPL3O75679 317 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 OR6B1O95007 311 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 IGF2P01344 180 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 GKN3PP0CG01 181 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 UBL4AP11441 157 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CD59P13987 128 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 BMP7P18075 431 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 OMPP47874 163 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 NR0B1P51843 470 aaKnown RBP12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CDH15P55291 814 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CTBP2P56545 445 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 RNF4P78317 190 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CDK5Q00535 292 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 GINS1Q14691 196 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 EXT1Q16394 746 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 OCLNQ16625 522 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 WBP2NLQ6ICG8 309 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 MRPL14Q6P1L8 145 aaKnown RBP12.38□□□□□ -0.43
PTCH1-215ENST00000547672 TMPRSS11FQ6ZWK6 438 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 PRICKLE2Q7Z3G6 844 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 B3GNT8Q7Z7M8 397 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 SLC15A4Q8N697 577 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 SLC38A9Q8NBW4 561 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 OR52L1Q8NGH7 329 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 OR4C3Q8NH37 302 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 C9orf43Q8TAL5 461 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-215ENST00000547672 ZNF420Q8TAQ5 688 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CNIH3Q8TBE1 160 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 MR1Q95460 341 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 NACC2Q96BF6 587 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 TMCO6Q96DC7 493 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 PLEKHA8Q96JA3 519 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 DDA1Q9BW61 102 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 POLDIP3Q9BY77 421 aaKnown RBP12.38□□□□□ -0.43
PTCH1-215ENST00000547672 ULBP3Q9BZM4 244 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CCDC90BQ9GZT6 254 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 C12orf10Q9HB07 376 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 CTPS2Q9NRF8 586 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 IL20Q9NYY1 176 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 BAIAP2Q9UQB8 552 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 DTX4Q9Y2E6 619 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
PTCH1-215ENST00000547672 NCOR1O75376 2440 aa12.38□□□□□ -0.43
PTCH1-215ENST00000547672 NPIPA5A0A0B4J1W7 369 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 A0A0B4J2E0 115 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 A0A1B0GX12 115 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 UNC119BA6NIH7 251 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 CLDN24A6NM45 220 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 NPIPA7E9PJI5 369 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 HCN1O60741 890 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 NPIPA8P0DM63 369 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 ITIH1P19827 911 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 EPHA2P29317 976 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 ACAA2P42765 397 aaKnown RBP12.37□□□□□ -0.43
PTCH1-215ENST00000547672 SLC35A2P78381 396 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 ALG10BQ5I7T1 473 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 TMEM201Q5SNT2 666 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 TCEAL6Q6IPX3 200 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
PTCH1-215ENST00000547672 NUP54Q7Z3B4 507 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 ZAR1Q86SH2 424 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms