RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 GABRA2P47869 451 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CCL7P80098 99 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MICAQ29983 383 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 HLA-BQ31612 363 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 TMEM196Q5HYL7 178 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 XKR5Q6UX68 686 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MYEOVQ96EZ4 313 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 C3orf30Q96M34 536 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 URM1Q9BTM9 101 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 OR10A4Q9H209 315 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CHRDQ9H2X0 955 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CCM2LQ9NUG4 571 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CSNK1G3Q9Y6M4 447 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 C4orf47A7E2U8 309 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SLC43A1O75387 559 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PENKP01210 267 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 CHRM4P08173 479 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SSTR4P31391 388 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CYB561P49447 251 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CCR5P51681 352 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 POU3F1Q03052 451 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 MVKQ03426 396 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CDNFQ49AH0 187 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 TP53I3Q53FA7 332 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PLCXD3Q63HM9 321 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 C22orf42Q6IC83 251 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 METTL4Q8N3J2 472 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SAMD12Q8N8I0 201 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 C16orf58Q96GQ5 468 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 EGLN2Q96KS0 407 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SMOC1Q9H4F8 434 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PRDM9Q9NQV7 894 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ENPP4Q9Y6X5 453 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 LAMB2P55268 1798 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 TRIM64BA6NI03 449 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 NME4O00746 187 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 JRKO75564 520 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 FGF4P08620 206 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 TRAM1Q15629 374 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ZNF791Q3KP31 576 aaPredicted RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 LANCL3Q6ZV70 420 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ZNF584Q8IVC4 421 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 OR51T1Q8NGJ9 327 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 OR1N1Q8NGS0 311 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 TMEM174Q8WUU8 243 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 LMF1Q96S06 567 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ELF4Q99607 663 aaPredicted RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 ULBP2Q9BZM5 246 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 QRSL1Q9H0R6 528 aaKnown RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 ZNF223Q9UK11 482 aaPredicted RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 A0A1W2PPC4 97 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 KDM4EB2RXH2 506 aaPredicted RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 MPPED1O15442 326 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 CTSLP07711 333 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 CNR2P34972 360 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 CARD18P57730 90 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 PUDPQ08623 228 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 TMEM69Q5SWH9 247 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 MRPL2Q5T653 305 aaKnown RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 SLC22A10Q63ZE4 541 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 CLEC14AQ86T13 490 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 C1orf210Q8IVY1 113 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ZNF740Q8NDX6 193 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ANKK1Q8NFD2 765 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 C15orf40Q8WUR7 153 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ATOH8Q96SQ7 321 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 HCAR1Q9BXC0 346 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 DPAGT1Q9H3H5 408 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 NGBQ9NPG2 151 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ENAMQ9NRM1 1142 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 GPR83Q9NYM4 423 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 IL37Q9NZH6 218 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 KLHL13Q9P2N7 655 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 LRRC42Q9Y546 428 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 RREB1Q92766 1687 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 RGPD4Q7Z3J3 1758 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 OR14I1A6ND48 311 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 TVP23AA6NH52 213 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 ZNF264O43296 627 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 GYPBP06028 91 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 RAC2P15153 192 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 CD1CP29017 333 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 MAGEA2P43356 314 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 CEACAM7Q14002 265 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 NADK2Q4G0N4 442 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 AFMIDQ63HM1 303 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 MED25Q71SY5 747 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 GALNT15Q8N3T1 639 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 INO80EQ8NBZ0 244 aaPredicted RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 KCNN1Q92952 543 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 FKBP10Q96AY3 582 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 YTHDF1Q9BYJ9 559 aaKnown RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 SLC22A4Q9H015 551 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 OR10A2Q9H208 303 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 COLQQ9Y215 455 aaPredicted RBP5.01□□□□□ -1.61
LRP6-203ENST00000538239 KIAA1551Q9HCM1 1747 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 J3KTA2 159 aa5.01□□□□□ -1.61
LRP6-203ENST00000538239 TNFRSF10CO14798 259 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms