RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ALG2Q9H553 416 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 EXD2Q9NVH0 621 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 FAIMQ9NVQ4 179 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 KLHL9Q9P2J3 617 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 BAIAP2L1Q9UHR4 511 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 TRAF6Q9Y4K3 522 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 SPIN1Q9Y657 262 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 SETD2Q9BYW2 2564 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 C17orf51A8MQB3 221 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 LSM1O15116 133 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 ADAMDEC1O15204 470 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 PEX11AO75192 247 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 CYP7B1O75881 506 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 PRKD3O94806 890 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 AK1P00568 194 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 CGAP01215 116 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 OPN1LWP04000 364 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 CD3EP07766 207 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 ACP2P11117 423 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 PRPS1L1P21108 318 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 P2RX1P51575 399 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 ATP5J2P56134 94 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 HPCAP84074 193 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 SELENBP1Q13228 472 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 KIAA0040Q15053 153 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 ATAD3BQ5T9A4 648 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 FAM219BQ5XKK7 198 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 CXorf67Q86X51 503 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 RFWD2Q8NHY2 731 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 CDS1Q92903 461 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 TUBGCP3Q96CW5 907 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 FAM120BQ96EK7 910 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 GATA5Q9BWX5 397 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 GSX2Q9BZM3 304 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 DNAJC15Q9Y5T4 150 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 AKAP6Q13023 2319 aa11.86□□□□□ -0.51
CLSTN3-205ENST00000535452 KIAA1549Q9HCM3 1950 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 PIP5K1BO14986 540 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 CLOCKO15516 846 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 SLU7O95391 586 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 AGR2O95994 175 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 IGKV1D-16P01601 117 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 SHBGP04278 402 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 FGF4P08620 206 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 BCKDHAP12694 445 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 PSMB1P20618 241 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 AGTR1P30556 359 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 PTH2RP49190 550 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 RPS4XP62701 263 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 PDE7AQ13946 482 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 P2RY6Q15077 328 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 ETFDHQ16134 617 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 CCNJQ5T5M9 372 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 Q6ZSR9 355 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 SH2D5Q6ZV89 423 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 FCRLAQ7L513 359 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 C16orf62Q7Z3J2 963 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 BANPQ8N9N5 519 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 SFXN5Q8TD22 340 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 HSD17B8Q92506 261 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 KISS1RQ969F8 398 aaPredicted RBP11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 MUCL1Q96DR8 90 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 C16orf58Q96GQ5 468 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 MRGPRX4Q96LA9 322 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 TXLNGYQ9BZA5 131 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 NTMQ9P121 344 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 PTGDR2Q9Y5Y4 395 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 MTORP42345 2549 aa11.85□□□□□ -0.51
CLSTN3-205ENST00000535452 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ZNF195O14628 629 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 HS3ST1O14792 307 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ZNF264O43296 627 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 CNOT4O95628 575 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 UBL4AP11441 157 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 CCKARP32238 428 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 FRKP42685 505 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ATP12AP54707 1039 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 CSNK2A1P68400 391 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 FOXF1Q12946 379 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 PCLAFQ15004 111 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 TMEM44Q2T9K0 475 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 PGS1Q32NB8 556 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 TMEM176BQ3YBM2 270 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ARL13AQ5H913 290 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 APOOLQ6UXV4 268 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 STAC2Q6ZMT1 411 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ZNF611Q8N823 705 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 FAM110BQ8TC76 370 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 ZFP90Q8TF47 636 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms