RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RRASP10301 218 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 TSPAN8P19075 237 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 DPP4P27487 766 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 ADORA2BP29275 332 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 ADSSP30520 456 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 HTR5AP47898 357 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 TLE4Q04727 773 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 DPYSL3Q14195 570 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 SLC25A24Q6NUK1 477 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 Q6P435 159 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 CXCL17Q6UXB2 119 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 Q7L0L9 218 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 ZNF573Q86YE8 665 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 MISPQ8IVT2 679 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 GMCL1P1Q8NEA9 526 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 FAM104AQ969W3 186 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 HAVCR1Q96D42 359 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 NOL4LQ96MY1 436 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-205ENST00000535375 TESK2Q96S53 571 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 PLEKHF1Q96S99 279 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 THUMPD2Q9BTF0 503 aaKnown RBP3.27□□□□□ -1.89
PRKDC-205ENST00000535375 NFKBIZQ9BYH8 718 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 OR51J1Q9H342 316 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 YAE1D1Q9NRH1 226 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 GALPQ9UBC7 116 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 KLK12Q9UKR0 248 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 MFHAS1Q9Y4C4 1052 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 SMIM28A0A1B0GU29 152 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 SAGE2PA6NJ88 616 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 ANKRD30BLA7E2S9 258 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 TRIM3O75382 744 aaPredicted RBP3.26□□□□□ -1.89
PRKDC-205ENST00000535375 HSPA5P11021 654 aaKnown RBP3.26□□□□□ -1.89
PRKDC-205ENST00000535375 CYP2F1P24903 491 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 NTSP30990 170 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 RPL29P47914 159 aaKnown RBP3.26□□□□□ -1.89
PRKDC-205ENST00000535375 MTTPP55157 894 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 ELP6Q0PNE2 266 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 ZNF154Q13106 437 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 LRRC36Q1X8D7 754 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 TMEM41BQ5BJD5 291 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 DNM1P46Q6ZS02 220 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 FADS6Q8N9I5 356 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 DCAF4L2Q8NA75 395 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 IPMKQ8NFU5 416 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 OR9A1PQ8NGU1 263 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 RAB7BQ96AH8 199 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 TRIM44Q96DX7 344 aaPredicted RBP3.26□□□□□ -1.89
PRKDC-205ENST00000535375 CD274Q9NZQ7 290 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 OR1A1Q9P1Q5 309 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 CGNQ9P2M7 1197 aaKnown RBP3.26□□□□□ -1.89
PRKDC-205ENST00000535375 ONECUT1Q9UBC0 465 aa3.26□□□□□ -1.89
PRKDC-205ENST00000535375 METP08581 1390 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 RAI1Q7Z5J4 1906 aaPredicted RBP3.25□□□□□ -1.89
PRKDC-205ENST00000535375 H0YL77 283 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 OR8U8P0C7N1 319 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 GSTT2P0CG29 244 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 GSTT2BP0CG30 244 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 PSG2P11465 335 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 HTR2AP28223 471 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 GNPDA1P46926 289 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 RND3P61587 244 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 MRPS11P82912 194 aaKnown RBP3.25□□□□□ -1.89
PRKDC-205ENST00000535375 VLDLRP98155 873 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 MPPED2Q15777 294 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 CDKN3Q16667 212 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 SCYL2Q6P3W7 929 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 NIPAL3Q6P499 406 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 LRRC70Q7Z2Q7 622 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 LHFPL4Q7Z7J7 247 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 ZNF589Q86UQ0 364 aaPredicted RBP3.25□□□□□ -1.89
PRKDC-205ENST00000535375 GCNT2Q8N0V5 402 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 OR2A12Q8NGT7 310 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 SLC25A39Q9BZJ4 359 aaPredicted RBP3.25□□□□□ -1.89
PRKDC-205ENST00000535375 SPRR3Q9UBC9 169 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 LAMP5Q9UJQ1 280 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 B9D1Q9UPM9 204 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 SAMD4AQ9UPU9 718 aaKnown RBP3.25□□□□□ -1.89
PRKDC-205ENST00000535375 GMPPBQ9Y5P6 360 aa3.25□□□□□ -1.89
PRKDC-205ENST00000535375 IGHV7-81A0A0B4J1V7 117 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 RSPH10B2B2RC85 870 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 OR4F21O95013 312 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 CHRNA1P02708 482 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 RSPH10BP0C881 870 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 TSPY4P0CV99 314 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 TSPY10P0CW01 314 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 H2AFXP16104 143 aaPredicted RBP3.24□□□□□ -1.89
PRKDC-205ENST00000535375 AXLP30530 894 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 SOX6P35712 828 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 ACADVLP49748 655 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 AANATQ16613 207 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 AGBL2Q5U5Z8 902 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 LRRC8BQ6P9F7 803 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 CBLN3Q6UW01 205 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 STAC2Q6ZMT1 411 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 ARMCX2Q7L311 632 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 CBWD2Q8IUF1 395 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 GRAMD2AQ8IUY3 354 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 TRUB1Q8WWH5 349 aaKnown RBP3.24□□□□□ -1.89
PRKDC-205ENST00000535375 IL1F10Q8WWZ1 152 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms