RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	NSUN5P2	Q63ZY6	315 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	SP5	Q6BEB4	398 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	HIST2H2BC	Q6DN03	193 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	HEPHL1	Q6MZM0	1159 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	CHMP1B	Q7LBR1	199 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	RNF130	Q86XS8	419 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	CCDC71	Q8IV32	467 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	MEIOB	Q8N635	442 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF614	Q8N883	585 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	LILRB4	Q8NHJ6	448 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	B4GALNT2	Q8NHY0	566 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZPLD1	Q8TCW7	415 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZFP90	Q8TF47	636 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	OIT3	Q8WWZ8	545 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	STON2	Q8WXE9	905 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	RAB8B	Q92930	207 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZBTB8A	Q96BR9	441 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	ROPN1L	Q96C74	230 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	SPDL1	Q96EA4	605 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	TRIB1	Q96RU8	372 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	PIGQ	Q9BRB3	760 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	NMUR2	Q9GZQ4	415 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF350	Q9GZX5	532 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	RABEP2	Q9H5N1	569 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	RUBCNL	Q9H714	662 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	CALHM2	Q9HA72	323 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	NPHS2	Q9NP85	383 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	KCNJ16	Q9NPI9	418 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	POLE3	Q9NRF9	147 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	TMEM45A	Q9NWC5	275 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	CCDC167	Q9P0B6	97 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692		Q9UFV3	132 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	DCTN4	Q9UJW0	460 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	MKLN1	Q9UL63	735 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	LIPT1	Q9Y234	373 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	VDAC3	Q9Y277	283 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	WDR45	Q9Y484	360 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	DTNA	Q9Y4J8	743 aa		4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	PRRC2A	P48634	2157 aa	Known RBP	4.55	□□□□□ -1.68
SNHG4-205	ENST00000507692	CSMD1	Q96PZ7	3565 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692		A0A096LPI6	279 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692		A0A0G2JND7	137 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	C7orf72	A4D263	438 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	MBD3L3	A6NE82	208 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TMEM247	A6NEH6	219 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SERINC4	A6NH21	518 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	FAM90A27P	A6NNH2	459 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CLCA1	A8K7I4	914 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	NPIPB9	F8W1W9	429 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	NR5A2	O00482	541 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	DVL2	O14641	736 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SEC14L5	O43304	696 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	HNRNPR	O43390	633 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	HCRTR2	O43614	444 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	KIAA0513	O60268	411 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	EIF4E2	O60573	245 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	FCMR	O60667	390 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TNFRSF21	O75509	655 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	UGT2B17	O75795	530 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CSTA	P01040	98 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	VIM	P08670	466 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZCCHC18	P0CG32	403 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	NR2F1	P10589	423 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	UBL4A	P11441	157 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	NCF2	P19878	526 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ME2	P23368	584 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	GRN	P28799	593 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CEACAM8	P31997	349 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ADH7	P40394	386 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	EIF1	P41567	113 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CRAT	P43155	626 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	STAR	P49675	285 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CCR4	P51679	360 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	DSTN	P60981	165 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	RPS3A	P61247	264 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF117	Q03924	483 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	FUT5	Q11128	374 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CBFB	Q13951	182 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	FGFBP1	Q14512	234 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CDSN	Q15517	529 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CD226	Q15762	336 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF141	Q15928	474 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SYPL1	Q16563	259 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TMEM44	Q2T9K0	475 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	PLPPR5	Q32ZL2	321 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SLC25A35	Q3KQZ1	300 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	AGK	Q53H12	422 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TYW3	Q6IPR3	259 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	BLOC1S3	Q6QNY0	202 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ARSK	Q6UWY0	536 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	FRRS1	Q6ZNA5	592 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	LRRC74B	Q6ZQY2	392 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	EIF3M	Q7L2H7	374 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	P4HA3	Q7Z4N8	544 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	GRAMD2A	Q8IUY3	354 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms