RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 A0A1B0GTH9 108 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 OR14I1A6ND48 311 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 CLDN24A6NM45 220 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 AQP7O14520 342 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 OIP5O43482 229 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 ZIC3O60481 467 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 CDC40O60508 579 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■□□□□ 8.2
RNF4-202ENST00000502316 TRAPPC6AO75865 159 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 CSTAP01040 98 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 IL7RP16871 459 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 PCGF2P35227 344 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 CPA2P48052 419 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 RNF144AP50876 292 aaPredicted RBP12.87□□□□□ -0.35
RNF4-202ENST00000502316 P2RX1P51575 399 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 MNAT1P51948 309 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 HSF1Q00613 529 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 VMACQ2NL98 169 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 GLYR1Q49A26 553 aaPredicted RBP12.87□□□□□ -0.35
RNF4-202ENST00000502316 LIN52Q52LA3 116 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 NHSL2Q5HYW2 709 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 HMGN2P46Q86SG4 172 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 SPPL2CQ8IUH8 684 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 OR52P1PQ8NH57 321 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 ARSGQ96EG1 525 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
RNF4-202ENST00000502316 LAT2Q9GZY6 243 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 EXOSC3Q9NQT5 275 aaKnown RBP12.87□□□□□ -0.35
RNF4-202ENST00000502316 TAS2R10Q9NYW0 307 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 DKKL1Q9UK85 242 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 ANGPT4Q9Y264 503 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 ZNF443Q9Y2A4 671 aaPredicted RBP12.87□□□□□ -0.35
RNF4-202ENST00000502316 IFT52Q9Y366 437 aa12.87□□□□□ -0.35
RNF4-202ENST00000502316 GPC6Q9Y625 555 aaPredicted RBP12.87□□□□□ -0.35
RNF4-202ENST00000502316 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 A0A087WZY1 265 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 C7orf72A4D263 438 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 CDHR4A6H8M9 788 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 FAM220BPB1ANY3 271 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 GTPBP1O00178 669 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 NME4O00746 187 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 GCM2O75603 506 aaPredicted RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 PDE9AO76083 593 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 PABPC4LP0CB38 370 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 SLC7A2P52569 658 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 GFRA1P56159 465 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 PSME3P61289 254 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 EEF1A1P68104 462 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 RBPJQ06330 500 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 MRPL49Q13405 166 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 VEZF1Q14119 521 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 TOMM20Q15388 145 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 TMEM44Q2T9K0 475 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.35
RNF4-202ENST00000502316 NDUFAF6Q330K2 333 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 EIPR1Q53HC9 387 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 WIPI1Q5MNZ9 446 aaPredicted RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 MRPL2Q5T653 305 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 ERICH5Q6P6B1 374 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 ARSKQ6UWY0 536 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 Q6ZPB1 254 aaPredicted RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 TRPM8Q7Z2W7 1104 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 YRDCQ86U90 279 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 VRK2Q86Y07 508 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 KRT73Q86Y46 540 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 OR5W2Q8NH69 310 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 OR14L1PQ8NHC6 308 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 ZNF607Q96SK3 696 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 LDAHQ9H6V9 325 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 SPAG4Q9NPE6 437 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 DNAJB12Q9NXW2 375 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 SPRR3Q9UBC9 169 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 CHST2Q9Y4C5 530 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 FREM3P0C091 2139 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
RNF4-202ENST00000502316 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
RNF4-202ENST00000502316 CCT8L1PA6NM43 557 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 J3QKU1 62 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 ETV2O00321 342 aaPredicted RBP12.85□□□□□ -0.35
RNF4-202ENST00000502316 SLC19A2O60779 497 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 LINGO3P0C6S8 592 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
RNF4-202ENST00000502316 T-ENOLP0DO92 83 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
RNF4-202ENST00000502316 ZNF17P17021 662 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 CALB2P22676 271 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 GNLYP22749 145 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 CHMP24386 653 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 PRKAR1BP31321 381 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 UQCRFS1P47985 274 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 B3GALT5-AS1P59052 145 aa12.85□□□□□ -0.35
RNF4-202ENST00000502316 ELOAQ14241 798 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms