RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PACSIN3Q9UKS6 424 aa18.28■□□□□ 0.52
CTSD-206ENST00000497544 PCNX3Q9H6A9 2034 aa18.28■□□□□ 0.52
CTSD-206ENST00000497544 DSPPQ9NZW4 1301 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 PRORSD1PA6NEY8 169 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 M0QX08 132 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 SNPHO15079 494 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 GMNNO75496 209 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 CSTAP01040 98 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 RFC3P40938 356 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 RNF144AP50876 292 aaPredicted RBP18.27■□□□□ 0.52
CTSD-206ENST00000497544 FOXO1Q12778 655 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 INPP5JQ15735 1006 aaPredicted RBP18.27■□□□□ 0.52
CTSD-206ENST00000497544 DNAL1Q4LDG9 190 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 EIF3MQ7L2H7 374 aaKnown RBP18.27■□□□□ 0.52
CTSD-206ENST00000497544 PATL1Q86TB9 770 aaKnown RBP18.27■□□□□ 0.52
CTSD-206ENST00000497544 ATCAYQ86WG3 371 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 VRK2Q86Y07 508 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 PLCZ1Q86YW0 608 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 ARHGAP24Q8N264 748 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 Q8NA96 180 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 ZFP62Q8NB50 900 aaPredicted RBP18.27■□□□□ 0.52
CTSD-206ENST00000497544 SLC26A7Q8TE54 656 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 SSC4DQ8WTU2 575 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 SLC7A6OSQ96CW6 309 aaPredicted RBP18.27■□□□□ 0.52
CTSD-206ENST00000497544 ARMC7Q9H6L4 198 aa18.27■□□□□ 0.52
CTSD-206ENST00000497544 NF1P21359 2839 aa18.27■□□□□ 0.51
CTSD-206ENST00000497544 FREM3P0C091 2139 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 CENPVL1A0A0U1RR11 272 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 TTLL8A6PVC2 850 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 ACOT7O00154 380 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 CRYABP02511 175 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 PABPC4LP0CB38 370 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 HSD17B1P14061 328 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 TCN1P20061 433 aaPredicted RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 RPS4Y1P22090 263 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 HTR1EP28566 365 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 ADH7P40394 386 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 UQCRFS1P47985 274 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 PCBP3P57721 371 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 PPIAP62937 165 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 PMP22Q01453 160 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 FGFBP1Q14512 234 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 CD226Q15762 336 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 SPATS1Q496A3 300 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 LIN52Q52LA3 116 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 ZNF311Q5JNZ3 666 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 CCDC80Q76M96 950 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 SLC22A16Q86VW1 577 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 CISD2Q8N5K1 135 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 OR4K17Q8NGC6 315 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 DTNBP1Q96EV8 351 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 GNRHR2Q96P88 292 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 THTPAQ9BU02 230 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 DSN1Q9H410 356 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 MED11Q9P086 117 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 B4GALT7Q9UBV7 327 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 SEC14L3Q9UDX4 400 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 CD300AQ9UGN4 299 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 PRPF19Q9UMS4 504 aaKnown RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 SLC35A3Q9Y2D2 325 aa18.26■□□□□ 0.51
CTSD-206ENST00000497544 GPC6Q9Y625 555 aaPredicted RBP18.26■□□□□ 0.51
CTSD-206ENST00000497544 CELSR1Q9NYQ6 3014 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 ZNF264O43296 627 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 HCRTR2O43614 444 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 CBR3O75828 277 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 CYP7B1O75881 506 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 IFNA14P01570 189 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 THBS1P07996 1170 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 UBL4AP11441 157 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 NID1P14543 1247 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 MSX1P28360 303 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 ALDH6A1Q02252 535 aaKnown RBP18.25■□□□□ 0.51
CTSD-206ENST00000497544 FNDC7Q5VTL7 733 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 FAM180AQ6UWF9 173 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 ARMC8Q8IUR7 673 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 CMIPQ8IY22 773 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 WDSUB1Q8N9V3 476 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 FIG4Q92562 907 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 SH3YL1Q96HL8 342 aaPredicted RBP18.25■□□□□ 0.51
CTSD-206ENST00000497544 TAAR6Q96RI8 345 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 TTTY12Q9BZ98 90 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 PTGES2Q9H7Z7 377 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 ZNF443Q9Y2A4 671 aaPredicted RBP18.25■□□□□ 0.51
CTSD-206ENST00000497544 CARD8Q9Y2G2 431 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 ADGRG4Q8IZF6 3080 aa18.25■□□□□ 0.51
CTSD-206ENST00000497544 FAM166BA8MTA8 275 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 CXCR6O00574 342 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 ADAM10O14672 748 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 GMFGO60234 142 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 EIF4E2O60573 245 aaKnown RBP18.24■□□□□ 0.51
CTSD-206ENST00000497544 SORBS2O94875 1100 aaKnown RBP18.24■□□□□ 0.51
CTSD-206ENST00000497544 MFN2O95140 757 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 KDELR2P33947 212 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 CEACAM7Q14002 265 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 TOMM20Q15388 145 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 ZSWIM7Q19AV6 140 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 MRPL2Q5T653 305 aaKnown RBP18.24■□□□□ 0.51
CTSD-206ENST00000497544 GLYATQ6IB77 296 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 FAM156AQ8NDB6 213 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 BHLHE22Q8NFJ8 381 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms