RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 M1APQ8TC57 530 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 ACTL9Q8TC94 416 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 C2CD4CQ8TF44 421 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 TFB1MQ8WVM0 346 aaKnown RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 TRUB1Q8WWH5 349 aaKnown RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 OSTF1Q92882 214 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 RFT1Q96AA3 541 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 OTUB2Q96DC9 234 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 DUS3LQ96G46 650 aaKnown RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 RMND5BQ96G75 393 aaPredicted RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 COQ2Q96H96 371 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 LRR1Q96L50 414 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 ZNF597Q96LX8 424 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 DUX5Q96PT3 197 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 TEFMQ96QE5 360 aaKnown RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 RAB40CQ96S21 281 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 RANBP9Q96S59 729 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 CCNL2Q96S94 520 aaPredicted RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 FEVQ99581 238 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 KLF6Q99612 283 aaPredicted RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 DOK1Q99704 481 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 CBWD1Q9BRT8 395 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 TMEM121Q9BTD3 319 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 C1orf50Q9BV19 199 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 RAB1BQ9H0U4 201 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 EFCAB1Q9HAE3 211 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 Q9N2J8 555 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 ZNF302Q9NR11 478 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 INIPQ9NRY2 104 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 C20orf96Q9NUD7 363 aaPredicted RBP4.38□□□□□ -1.71
RTN4-215ENST00000491592 TMEM45AQ9NWC5 275 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 MTCH1Q9NZJ7 389 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 RIMS3Q9UJD0 308 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 ROBO1Q9Y6N7 1651 aa4.38□□□□□ -1.71
RTN4-215ENST00000491592 LOC390937A0A1W2PQ73 354 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 TMEM129A0AVI4 362 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 OR6C68A6NDL8 312 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 MGAT4DA6NG13 374 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 FAM159BA6NKW6 160 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 WASHC1A8K0Z3 465 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 C17orf100A8MU93 164 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 A8MUA0 341 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 NPIPB11E5RHQ5 1161 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 NPIPA2E9PIF3 369 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 PPIAL4DF5H284 164 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 RHODO00212 210 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 WWP2O00308 870 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 FBP2O00757 339 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 PTGESO14684 152 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 AIM2O14862 343 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 COCHO43405 550 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 KDELR3O43731 214 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 SNAP91O60641 907 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CST8O60676 142 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 UPK3AO75631 287 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 SCGNO76038 276 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 C1QAP02745 245 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 FCER2P06734 321 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 PROS1P07225 676 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 FGF3P11487 239 aaPredicted RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 KDELR1P24390 212 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ACKR3P25106 362 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ELAVL4P26378 380 aaKnown RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 GIFP27352 417 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CDH5P33151 784 aaPredicted RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 PTGFRP43088 359 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ABCE1P61221 599 aaKnown RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 SSBP2P81877 361 aaPredicted RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 CAPRIN1Q14444 709 aaKnown RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 VAMP3Q15836 100 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 UGT3A2Q3SY77 523 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 PIGGQ5H8A4 983 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CDKL4Q5MAI5 379 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 WSCD1Q658N2 575 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 PYHIN1Q6K0P9 492 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 NEPROQ6NW34 567 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 NIPAL3Q6P499 406 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 FAM171BQ6P995 826 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 DCUN1D2Q6PH85 259 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CBLN3Q6UW01 205 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 EPGNQ6UW88 154 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 WASH2PQ6VEQ5 465 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CARM1Q86X55 608 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 HPS6Q86YV9 775 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 GPD1LQ8N335 351 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CPSF7Q8N684 471 aaKnown RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 ZNF680Q8NEM1 530 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 OR4A16Q8NH70 328 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 SLC38A4Q969I6 547 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ADIPOR1Q96A54 375 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 RTP4Q96DX8 246 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 CERS2Q96G23 380 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ANKRD36BP1Q96IX9 119 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ZFYVE19Q96K21 471 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 ZNF514Q96K75 400 aaPredicted RBP4.37□□□□□ -1.71
RTN4-215ENST00000491592 LMLNQ96KR4 655 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 GLT1D1Q96MS3 346 aa4.37□□□□□ -1.71
RTN4-215ENST00000491592 SPATA33Q96N06 139 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms