RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PTGS2P35354 604 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 ADH7P40394 386 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 P2RX1P51575 399 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 PSME3P61289 254 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 HSF1Q00613 529 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF117Q03924 483 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 FGFBP1Q14512 234 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 LIN52Q52LA3 116 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 EIPR1Q53HC9 387 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF311Q5JNZ3 666 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 WIPI1Q5MNZ9 446 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-219ENST00000488186 INTS11Q5TA45 600 aaKnown RBP14.31□□□□□ -0.12
C9orf3-219ENST00000488186 AP1ARQ63HQ0 302 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 TRILQ7L0X0 811 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 CMIPQ8IY22 773 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 C10orf111Q8N326 155 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 FADS6Q8N9I5 356 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 SLC26A7Q8TE54 656 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 LAT2Q9GZY6 243 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 SLC6A15Q9H2J7 730 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 UBQLN3Q9H347 655 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 NDE1Q9NXR1 346 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 KCNE5Q9UJ90 142 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 RPH3AQ9Y2J0 694 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-219ENST00000488186 MRPS18CQ9Y3D5 142 aaKnown RBP14.31□□□□□ -0.12
C9orf3-219ENST00000488186 GTF3C1Q12789 2109 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 RELNP78509 3460 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 A0A087WZY1 265 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 IGLV3-32A0A0A0MS00 114 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 PRRG2O14669 202 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 GSTA4O15217 222 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 WISP2O76076 250 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 IGHG3P01860 377 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 UBTFL6P0CB48 400 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-219ENST00000488186 NID1P14543 1247 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 ETS2P15036 469 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 GNLYP22749 145 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 AQP1P29972 269 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 SLC7A2P52569 658 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 KCNC4Q03721 635 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 MRPL49Q13405 166 aaKnown RBP14.3□□□□□ -0.12
C9orf3-219ENST00000488186 CBFBQ13951 182 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 MAPK11Q15759 364 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 ADRM1Q16186 407 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 ZSWIM7Q19AV6 140 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 RAET1LQ5VY80 246 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 ERICH5Q6P6B1 374 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 AAGABQ6PD74 315 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 C16orf89Q6UX73 402 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 TRPM8Q7Z2W7 1104 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 NEIL3Q8TAT5 605 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 PRR7Q8TB68 274 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 SARAFQ96BY9 339 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 C1GALT1C1Q96EU7 318 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 REXO5Q96IC2 774 aaKnown RBP14.3□□□□□ -0.12
C9orf3-219ENST00000488186 SFXN2Q96NB2 322 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 ADA2Q9NZK5 511 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 SLC13A4Q9UKG4 626 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 OSGIN2Q9Y236 505 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 VDAC3Q9Y277 283 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF443Q9Y2A4 671 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-219ENST00000488186 LIPGQ9Y5X9 500 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 TENM4Q6N022 2769 aa14.3□□□□□ -0.12
C9orf3-219ENST00000488186 CENPVL1A0A0U1RR11 272 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 PRORSD1PA6NEY8 169 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 CCT8L1PA6NM43 557 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 B2RBV5 119 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 NPIPA2E9PIF3 369 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 NPIPA3F8WFD2 350 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 AQP7O14520 342 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 TPOP07202 933 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 THBS1P07996 1170 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 UQCRBP14927 111 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 SUMO3P55854 103 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-219ENST00000488186 VMACQ2NL98 169 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.29□□□□□ -0.12
C9orf3-219ENST00000488186 EIF2S3LQ2VIR3 472 aaKnown RBP14.29□□□□□ -0.12
C9orf3-219ENST00000488186 NDUFAF6Q330K2 333 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 WLSQ5T9L3 541 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 NET1Q7Z628 596 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-219ENST00000488186 VRK2Q86Y07 508 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 PTOV1Q86YD1 416 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 SPPL2CQ8IUH8 684 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 ZZZ3Q8IYH5 903 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 OR2T12Q8NG77 320 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 OR5W2Q8NH69 310 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 ABTB1Q969K4 478 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-219ENST00000488186 PIGQQ9BRB3 760 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 GPATCH1Q9BRR8 931 aaKnown RBP14.29□□□□□ -0.12
C9orf3-219ENST00000488186 OR2B2Q9GZK3 357 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 SPAG4Q9NPE6 437 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 CMTM6Q9NX76 183 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 ALKBH4Q9NXW9 302 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 STOML1Q9UBI4 398 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 SLC6A5Q9Y345 797 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 HRH3Q9Y5N1 445 aa14.29□□□□□ -0.12
C9orf3-219ENST00000488186 TRGV8A0A0C4DH27 118 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 A0A1B0GVC2 190 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ELOVL7A1L3X0 281 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CLEC18AA5D8T8 446 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms