RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MAN2C1Q9NTJ4 1040 aa13.47□□□□□ -0.25
POLR2J3-204ENST00000486319 KCNE5Q9UJ90 142 aa13.47□□□□□ -0.25
POLR2J3-204ENST00000486319 MKL2Q9ULH7 1088 aa13.47□□□□□ -0.25
POLR2J3-204ENST00000486319 CBLCQ9ULV8 474 aa13.47□□□□□ -0.25
POLR2J3-204ENST00000486319 OR10H1Q9Y4A9 318 aa13.47□□□□□ -0.25
POLR2J3-204ENST00000486319 MGAQ8IWI9 3026 aa13.47□□□□□ -0.25
POLR2J3-204ENST00000486319 TRIM64CA6NLI5 447 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 CPSF4LA6NMK7 179 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 A8MUA0 341 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 FRS3O43559 492 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 POU2F1P14859 743 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 GGT2P36268 569 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 IFNGR2P38484 337 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 STAT5AP42229 794 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 RFX3P48380 749 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 HLCSP50747 726 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 GABARAPL2P60520 117 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 DCAF7P61962 342 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 DCDP81605 110 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 COX10Q12887 443 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 FOXD4Q12950 439 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 CDK5R2Q13319 367 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 CTU2Q2VPK5 515 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 NKAIN1Q4KMZ8 207 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 MRPL2Q5T653 305 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 PGBD2Q6P3X8 592 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 KLHL17Q6TDP4 642 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 OR4N2Q8NGD1 307 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 STT3BQ8TCJ2 826 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 SLC2A12Q8TD20 617 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 OIT3Q8WWZ8 545 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 ZNF566Q969W8 418 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 UBL7Q96S82 380 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 OR8D2Q9GZM6 311 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 SLC22A11Q9NSA0 550 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.25
POLR2J3-204ENST00000486319 NPIPA5A0A0B4J1W7 369 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CENPVL1A0A0U1RR11 272 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 SMIM31A0A1B0GVY4 71 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CLDN24A6NM45 220 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 NPIPA7E9PJI5 369 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 TPST2O60704 377 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 FMO6PO60774 539 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CPNE3O75131 537 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 DDAH2O95865 285 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 IGKV3-11P04433 115 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 ZGLP1P0C6A0 271 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CCDC159P0C7I6 412 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 NPIPA8P0DM63 369 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 OSMP13725 252 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 DRD5P21918 477 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CRHBPP24387 322 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 EPHA2P29317 976 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 DLSTP36957 453 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 PPICP45877 212 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 ZNF136P52737 540 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CXCR4P61073 352 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 ZNF141Q15928 474 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 C1orf94Q6P1W5 598 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 RRM2BQ7LG56 351 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 GRAMD2AQ8IUY3 354 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 DEPDC4Q8N2C3 294 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 BCORP1Q8N888 145 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 SLC38A9Q8NBW4 561 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 MORN4Q8NDC4 146 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 OR4K5Q8NGD3 323 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 ADAMTS16Q8TE57 1224 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 ZNF721Q8TF20 911 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 SLC35B4Q969S0 331 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CTPS2Q9NRF8 586 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 COPS7AQ9UBW8 275 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 CTSFQ9UBX1 484 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 TESQ9UGI8 421 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 MRTO4Q9UKD2 239 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 PCDHGA6Q9Y5G7 932 aa13.45□□□□□ -0.26
POLR2J3-204ENST00000486319 ERVH48-1M5A8F1 160 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 SLC1A7O00341 560 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 ANGPTL1O95841 491 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 IGKV1D-16P01601 117 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 TCN2P20062 427 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 EEF1B2P24534 225 aaKnown RBP13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 CRISP1P54107 249 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 ATP12AP54707 1039 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 CDH15P55291 814 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 CSNK2BP67870 215 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 MAD2L1BPQ15013 274 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 DECR1Q16698 335 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 PDZK1Q5T2W1 519 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 CD300LDQ6UXZ3 194 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 OVCH1Q7RTY7 1134 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 LAPTM4BQ86VI4 370 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 CMIPQ8IY22 773 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 PRSS58Q8IYP2 241 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 SLC41A3Q96GZ6 507 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 IL17BQ9UHF5 180 aa13.44□□□□□ -0.26
POLR2J3-204ENST00000486319 A0A087WUU8 490 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms