RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ACTRT2Q8TDY3 377 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 SMAP2Q8WU79 429 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 ANP32BQ92688 251 aaKnown RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 HTRA1Q92743 480 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 FBXW5Q969U6 566 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 CIDECQ96AQ7 238 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 ZBTB8AQ96BR9 441 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 S100PBPQ96BU1 408 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 SH3YL1Q96HL8 342 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 EGLN2Q96KS0 407 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 OR10A4Q9H209 315 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 C12orf49Q9H741 205 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 EML4Q9HC35 981 aaKnown RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 TNFRSF12AQ9NP84 129 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 FANCFQ9NPI8 374 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 GLRX2Q9NS18 164 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 PAQR5Q9NXK6 330 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 EMCNQ9ULC0 261 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 RNF115Q9Y4L5 304 aa8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
SMARCE1-210ENST00000481231 NBEAL2Q6ZNJ1 2754 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 A0A1W2PP18 115 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 G3V2L1 256 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PDPK1O15530 556 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 KIAA0513O60268 411 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 GCM2O75603 506 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 RSL1D1O76021 490 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 KCNK2O95069 426 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 TUBBP07437 444 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ACP2P11117 423 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PYGBP11216 843 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PRPS2P11908 318 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PTNP21246 168 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 NUDT6P53370 316 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PRKAG1P54619 331 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 TSC22D1Q15714 1073 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ZNF239Q16600 458 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 DUSP5Q16690 384 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 WHAMMP3Q1A5X7 153 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PGGHGQ32M88 737 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 VPS26BQ4G0F5 336 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ADAM5Q6NVV9 412 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 FIGNL1Q6PIW4 674 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 TFAP2EQ6VUC0 442 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ESPNLQ6ZVH7 1005 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ATG4DQ86TL0 474 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 GABRG1Q8N1C3 465 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 DEPDC4Q8N2C3 294 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ZNF619Q8N2I2 560 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 CEP112Q8N8E3 955 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 CDRT4Q8N9R6 151 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 SLC16A11Q8NCK7 471 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 STEAP2Q8NFT2 490 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 OR10H5Q8NGA6 315 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 RNF128Q8TEB7 428 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 ABHD3Q8WU67 409 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 OSTF1Q92882 214 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 GIMAP5Q96F15 307 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 KLHL15Q96M94 604 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 TACO1Q9BSH4 297 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 BARX1Q9HBU1 254 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 HHATLQ9HCP6 504 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 FBXO34Q9NWN3 711 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 NTMQ9P121 344 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 KCNS2Q9ULS6 477 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 CCL27Q9Y4X3 112 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 PTGDR2Q9Y5Y4 395 aa8.37□□□□□ -1.07
SMARCE1-210ENST00000481231 NPIPB8E9PQR5 432 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 AKAP10O43572 662 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 CRCPO75575 148 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 URI1O94763 535 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 NTN1O95631 604 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 GSTA1P08263 222 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 LINGO3P0C6S8 592 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 PABPC4LP0CB38 370 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 MYL2P10916 166 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 IL32P24001 234 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 GPC1P35052 558 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 SFTPDP35247 375 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 PRIM2P49643 509 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 CARD18P57730 90 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 FOXF1Q12946 379 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 SQLEQ14534 574 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 KIAA0040Q15053 153 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 TAB1Q15750 504 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 CD226Q15762 336 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 ZNF385BQ569K4 471 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 FAM166AQ6J272 317 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 CLEC2AQ6UVW9 174 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 SEZ6L2Q6UXD5 910 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 ZYG11AQ6WRX3 759 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 FRMD7Q6ZUT3 714 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 NUFIP2Q7Z417 695 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 SZRD1Q7Z422 152 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 TRABD2AQ86V40 505 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 MISPQ8IVT2 679 aa8.36□□□□□ -1.07
SMARCE1-210ENST00000481231 LILRA2Q8N149 483 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms