RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MAGEB2O15479 319 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SPINT2O43291 252 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TNFSF14O43557 240 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CHMP2AO43633 222 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 KDELR3O43731 214 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CST8O60676 142 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GLRA3O75311 464 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 LRCH4O75427 683 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GATBO75879 557 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 B3GAT3O94766 335 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GLCEO94923 617 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ANP32DO95626 131 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 IGHV2-70P01814 119 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PIGRP01833 764 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PPBPP02775 128 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GBAP04062 536 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SERPING1P05155 500 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 FCER2P06734 321 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 KLK3P07288 261 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 LYNP07948 512 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GSTA1P08263 222 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 MELTFP08582 738 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 HCKP08631 526 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ANXA4P09525 319 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 FAM58BPP0C7Q3 252 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SMIM6P0DI80 62 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 C8orf89P0DMQ9 161 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 DBTP11182 482 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 RNH1P13489 461 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 ADRB3P13945 408 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CD1EP15812 388 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RPA2P15927 270 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CD36P16671 472 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZNF7P17097 686 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 PSMC3P17980 439 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TCP1P17987 556 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 CDH2P19022 906 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 WARSP23381 471 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 F8A1P23610 371 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 DTYMKP23919 212 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 HOXC9P31274 260 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SHMT2P34897 504 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RCVRNP35243 200 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SOAT1P35610 550 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 NAMPTP43490 491 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 EIF2B2P49770 351 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 SERPINH1P50454 418 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 CDH8P55286 799 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RGS8P57771 180 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 PSME3P61289 254 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 YWHAGP61981 247 aaKnown RBP eCLIP2.22□□□□□ -2.05
XRN1-211ENST00000477237 GABPAQ06546 454 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZFP36L1Q07352 338 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 STX3Q13277 289 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RIGQ13278 110 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TDGQ13569 410 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TFDP1Q14186 410 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 IL11RAQ14626 422 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 DRAP1Q14919 205 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 TGFBIQ15582 683 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TOMM34Q15785 309 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 KCNJ8Q15842 424 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PSG3Q16557 428 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PDK4Q16654 411 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 HIST2H2ACQ16777 129 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 C18orf21Q32NC0 220 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 ALKBH6Q3KRA9 238 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RABGAP1LQ5R372 815 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SEL1L2Q5TEA6 688 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GPR157Q5UAW9 335 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GPR107Q5VW38 600 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 HACD4Q5VWC8 232 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PLCXD3Q63HM9 321 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 NCR3LG1Q68D85 454 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 NIPAL1Q6NVV3 410 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZNF343Q6P1L6 599 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZFP1Q6P2D0 407 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TMEM220Q6QAJ8 160 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ARSKQ6UWY0 536 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SLC35D2Q76EJ3 337 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GSTA5Q7RTV2 222 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PID1Q7Z2X4 250 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ABHD12BQ7Z5M8 362 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 DPPA2Q7Z7J5 298 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CATSPERDQ86XM0 798 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ECHDC2Q86YB7 292 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 IFT20Q8IY31 132 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CFAP206Q8IYR0 622 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZBED8Q8IZ13 594 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 BATF2Q8N1L9 274 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 BEST3Q8N1M1 668 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 UBE2J2Q8N2K1 259 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 FADS6Q8N9I5 356 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SYT14Q8NB59 555 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CAMKVQ8NCB2 501 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PAPD5Q8NDF8 572 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 FAM83FQ8NEG4 500 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR2L5Q8NG80 312 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR9K2Q8NGE7 335 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms