RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ASH1LQ9NR48 2969 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 FLNCQ14315 2725 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 NBPF19A0A087WUL8 3843 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 RP1L1Q8IWN7 2480 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 CENPVL1A0A0U1RR11 272 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 C7orf72A4D263 438 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 SYT5O00445 386 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 DVL2O14641 736 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 ZNF264O43296 627 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 SEC14L5O43304 696 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 EIF4E2O60573 245 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 EDF1O60869 148 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 TNFRSF21O75509 655 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 KRT75O95678 551 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 NUDT14O95848 222 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TGM6O95932 706 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 OPN1LWP04000 364 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 LINGO3P0C6S8 592 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TMIGD3P0DMS9 266 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 ZNF17P17021 662 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 PSMA4P25789 261 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 ANXA11P50995 505 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 SUMO3P55854 103 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 RAC1P63000 192 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TXNL4AP83876 142 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 CHRNEQ04844 493 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 FUT5Q11128 374 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 FOXF2Q12947 444 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TOMM34Q15785 309 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 MAPK14Q16539 360 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 SYPL1Q16563 259 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 NDUFAF6Q330K2 333 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 GTDC1Q4AE62 458 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TIGD2Q4W5G0 525 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 SLC2A7Q6PXP3 512 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 MEX3BQ6ZN04 569 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 MSANTD1Q6ZTZ1 278 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 GRAMD2AQ8IUY3 354 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 FUNDC1Q8IVP5 155 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 MCEMP1Q8IX19 187 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 ZNF295-AS1Q8N0V1 137 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 ZNF619Q8N2I2 560 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 GTPBP8Q8N3Z3 284 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 ANKFN1Q8N957 763 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 RELL2Q8NC24 303 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 RFWD2Q8NHY2 731 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 GPR119Q8TDV5 335 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 SMPDL3BQ92485 455 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 GTF2H4Q92759 462 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 INTS12Q96CB8 462 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 RNF145Q96MT1 663 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TM9SF2Q99805 663 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 TREX2Q9BQ50 279 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 POLE3Q9NRF9 147 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 STOML1Q9UBI4 398 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 LIPT1Q9Y234 373 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 USP9XQ93008 2570 aaPredicted RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 PHF3Q92576 2039 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 DNAJC13O75165 2243 aa8.25□□□□□ -1.09
SYN3-211ENST00000472027 DIDO1Q9BTC0 2240 aaKnown RBP8.25□□□□□ -1.09
SYN3-211ENST00000472027 FREM3P0C091 2139 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 SLC22A20A6NK97 555 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 EIF1AYO14602 144 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 EFNA2O43921 213 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 KIAA0513O60268 411 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 CYP7B1O75881 506 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 H6PDO95479 791 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 IL18BPO95998 194 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 CSTAP01040 98 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 CHRM4P08173 479 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 UBL4AP11441 157 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 ETFAP13804 333 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 IGFBP2P18065 325 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 NCF2P19878 526 aaPredicted RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 ADH6P28332 368 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 OPRM1P35372 400 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 EIF1P41567 113 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 CRATP43155 626 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 MAGEA8P43361 318 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 ATP4BP51164 291 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 MVDP53602 400 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 DLX5P56178 289 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 RPS3AP61247 264 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 IRX1P78414 480 aaPredicted RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 KCNJ10P78508 379 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 FOXF1Q12946 379 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 CBFBQ13951 182 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 FGFBP1Q14512 234 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 SGCBQ16585 318 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 AGKQ53H12 422 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 C6orf10Q5SRN2 563 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 FRRS1Q6ZNA5 592 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 LRRC74BQ6ZQY2 392 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 EIF3MQ7L2H7 374 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 GGNQ86UU5 652 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 DMRTC2Q8IXT2 367 aaPredicted RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 GCNT2Q8N0V5 402 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms