RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 RUNDC3AQ59EK9 446 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CMPK2Q5EBM0 449 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PAGE3Q5JUK9 113 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 INTS11Q5TA45 600 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 RNF220Q5VTB9 566 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 REEP3Q6NUK4 255 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 C8orf82Q6P1X6 216 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MTFR2Q6P444 385 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ERICH5Q6P6B1 374 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SLC2A7Q6PXP3 512 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 C16orf47Q6ZP98 133 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 Q6ZPB1 254 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 DHDDSQ86SQ9 333 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF605Q86T29 641 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MTDHQ86UE4 582 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PLCZ1Q86YW0 608 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GRAMD2AQ8IUY3 354 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MSRB3Q8IXL7 192 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF440Q8IYI8 595 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ARHGAP24Q8N264 748 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GHDCQ8N2G8 530 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF619Q8N2I2 560 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FADS6Q8N9I5 356 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 WDSUB1Q8N9V3 476 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 C11orf65Q8NCR3 313 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CCDC197Q8NCU1 140 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FAM71CQ8NEG0 241 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OR4N2Q8NGD1 307 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OR1J4Q8NGS1 313 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OR4C3Q8NH37 302 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OR5AK3PQ8NH89 298 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 BBS10Q8TAM1 723 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 NEIL3Q8TAT5 605 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GRHL3Q8TE85 626 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SLC38A5Q8WUX1 472 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 RASSF5Q8WWW0 418 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PIK3R3Q92569 461 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 JADE3Q92613 823 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CDS1Q92903 461 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 POP5Q969H6 163 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ZBTB8AQ96BR9 441 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 EFHD2Q96C19 240 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 LRRC58Q96CX6 371 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ARSGQ96EG1 525 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 RMND5BQ96G75 393 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 C16orf58Q96GQ5 468 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 REXO5Q96IC2 774 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MAGED4Q96JG8 741 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MARK4Q96L34 752 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GPR137Q96N19 417 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 NODALQ96S42 347 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HOPXQ9BPY8 73 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TREX2Q9BQ50 279 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CPPED1Q9BRF8 314 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GPATCH1Q9BRR8 931 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 INPP5KQ9BT40 448 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SPATA5L1Q9BVQ7 753 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CCDC106Q9BWC9 280 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TBL1XR1Q9BZK7 514 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OR2B2Q9GZK3 357 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SLC38A1Q9H2H9 487 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OR51I1Q9H343 314 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 KAT8Q9H7Z6 458 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MTHFD2LQ9H903 347 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ANKRA2Q9H9E1 313 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 LIN28AQ9H9Z2 209 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 EFCAB1Q9HAE3 211 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SPAG4Q9NPE6 437 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 EQTNQ9NQ60 294 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SLC6A13Q9NSD5 602 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ASF1BQ9NVP2 202 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ANKRD10Q9NXR5 420 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 KLRF1Q9NZS2 232 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ARMCX1Q9P291 453 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 STOML1Q9UBI4 398 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ICAM5Q9UMF0 924 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SLC35A3Q9Y2D2 325 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF835Q9Y2P0 537 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 IFT52Q9Y366 437 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 WDR45Q9Y484 360 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 DTNAQ9Y4J8 743 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MPDZO75970 2070 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HRNRQ86YZ3 2850 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ANKHD1Q8IWZ3 2542 aaKnown RBP3.2□□□□□ -1.9
TRIM59-202ENST00000468542 MAST4O15021 2626 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 INTS1Q8N201 2190 aaKnown RBP3.2□□□□□ -1.9
TRIM59-202ENST00000468542 LOC100653049A0A140TA62 436 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 GXYLT2A0PJZ3 443 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 CDHR4A6H8M9 788 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 ANKUB1A6NFN9 424 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 SERINC4A6NH21 518 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 C9JVG2 144 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 E9PLN8 166 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 SYT5O00445 386 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF264O43296 627 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 HCRTR2O43614 444 aa3.2□□□□□ -1.9
TRIM59-202ENST00000468542 SLC28A2O43868 658 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms