RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 EID3Q8N140 333 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 FAM156AQ8NDB6 213 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 OR1J4Q8NGS1 313 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 DUSP19Q8WTR2 217 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 FIG4Q92562 907 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 POP5Q969H6 163 aaKnown RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 MCUR1Q96AQ8 359 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 MFRPQ9BY79 579 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 TTTY12Q9BZ98 90 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 UBQLN3Q9H347 655 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF703Q9H7S9 590 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ACTR3BQ9P1U1 418 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 B4GALT7Q9UBV7 327 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 EGFL7Q9UHF1 273 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ANAPC2Q9UJX6 822 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 PACSIN3Q9UKS6 424 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ICAM5Q9UMF0 924 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 C15orf41Q9Y2V0 281 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 MRPS18CQ9Y3D5 142 aaKnown RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 CHST2Q9Y4C5 530 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 FREM3P0C091 2139 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 G3V3Y1 287 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ACOT7O00154 380 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 GTPBP1O00178 669 aaKnown RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 FAAHO00519 579 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ARPC2O15144 300 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 PDE5AO76074 875 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 CRYABP02511 175 aaKnown RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 TCN1P20061 433 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 CD247P20963 164 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 SLC6A8P48029 635 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 KCNJ5P48544 419 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 P2RX1P51575 399 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF117Q03924 483 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 MTX3Q5HYI7 312 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 LCN8Q6JVE9 175 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 CBLL1Q75N03 491 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 SLC22A16Q86VW1 577 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ULK2Q8IYT8 1036 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 OR2M3Q8NG83 312 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ARSGQ96EG1 525 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 RSPO3Q9BXY4 272 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 PTGES2Q9H7Z7 377 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 OLAHQ9NV23 265 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ADPRHL2Q9NX46 363 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 DNAJB12Q9NXW2 375 aaKnown RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 RALYQ9UKM9 306 aaKnown RBP13.84□□□□□ -0.19
NPHP4-205ENST00000466897 BAG5Q9UL15 447 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 FAM208BQ5VWN6 2430 aa13.84□□□□□ -0.19
NPHP4-205ENST00000466897 ANKUB1A6NFN9 424 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 CLDN24A6NM45 220 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 TMEM229AB2RXF0 380 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 B4DXG7 233 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 HCRTR2O43614 444 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 LGI1O95970 557 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 SELENOWP63302 87 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 INPP5JQ15735 1006 aaPredicted RBP13.83□□□□□ -0.2
NPHP4-205ENST00000466897 DUSP7Q16829 419 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 LRRC23Q53EV4 343 aaPredicted RBP13.83□□□□□ -0.2
NPHP4-205ENST00000466897 CYBRD1Q53TN4 286 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 CBLN3Q6UW01 205 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 HMGN2P46Q86SG4 172 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 FAM109AQ8N4B1 249 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 GATSQ8NAP1 163 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 OR4K17Q8NGC6 315 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 OR5W2Q8NH69 310 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 LZICQ8WZA0 190 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 FAM162AQ96A26 154 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 CLPTM1LQ96KA5 538 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 TAAR6Q96RI8 345 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 PCDHAC1Q9H158 963 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 ZDHHC11Q9H8X9 412 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 DCAF13Q9NV06 445 aaKnown RBP13.83□□□□□ -0.2
NPHP4-205ENST00000466897 KLHL28Q9NXS3 571 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 RPS6KA6Q9UK32 745 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 SAMD4AQ9UPU9 718 aaKnown RBP13.83□□□□□ -0.2
NPHP4-205ENST00000466897 CARD8Q9Y2G2 431 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 HRH3Q9Y5N1 445 aa13.83□□□□□ -0.2
NPHP4-205ENST00000466897 A0A087WZY1 265 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 C2orf72A6NCS6 295 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 ETV2O00321 342 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-205ENST00000466897 ACOT8O14734 319 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 GNB5O14775 395 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 SUV39H1O43463 412 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 TPST1O60507 370 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 BCAS1O75363 584 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-205ENST00000466897 EPPINO95925 133 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 OPN1SWP03999 348 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 UBTFL6P0CB48 400 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-205ENST00000466897 NCK1P16333 377 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 ZNF24P17028 368 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 SRD5A2P31213 254 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 DLX5P56178 289 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 DSCR4P56555 118 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-205ENST00000466897 PLGLB1Q02325 96 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 CBFBQ13951 182 aa13.82□□□□□ -0.2
NPHP4-205ENST00000466897 GLYR1Q49A26 553 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms