RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 HSPA4LO95757 839 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 FESP07332 822 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ACP2P11117 423 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 PRPH2P23942 346 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 SHC1P29353 583 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ECHS1P30084 290 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 FRKP42685 505 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-210ENST00000464078 MANFP55145 182 aaKnown RBP15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ITGADQ13349 1161 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 NRF1Q16656 503 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ALKBH2Q6NS38 261 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 SSX8Q7RTT4 187 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 NUFIP2Q7Z417 695 aaKnown RBP15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ZAR1Q86SH2 424 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ATG4DQ86TL0 474 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-210ENST00000464078 GATSQ8NAP1 163 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 SLC16A11Q8NCK7 471 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 B4GALNT2Q8NHY0 566 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ZFP28Q8NHY6 868 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 ROBO4Q8WZ75 1007 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 SH3YL1Q96HL8 342 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-210ENST00000464078 HS6ST2Q96MM7 605 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 KLHDC3Q9BQ90 382 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 SRXN1Q9BYN0 137 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 FAIMQ9NVQ4 179 aa15.35■□□□□ 0.05
HMGN1-210ENST00000464078 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.35■□□□□ 0.054e-11■■■■■ 27.5
HMGN1-210ENST00000464078 A0A096LNT2 108 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 GJE1A6NN92 205 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-210ENST00000464078 CD8AP01732 235 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 GSTA1P08263 222 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 ABHD2P08910 425 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 HPGDP15428 266 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 GCAP28676 217 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 GPC1P35052 558 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 SFTPDP35247 375 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 SERPINB4P48594 390 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 PRIM2P49643 509 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 FOXF1Q12946 379 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 KIAA0040Q15053 153 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 TSC22D1Q15714 1073 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 CD226Q15762 336 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 DUSP5Q16690 384 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 ZCCHC12Q6PEW1 402 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 SYT10Q6XYQ8 523 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 Q6ZT83 130 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 FCRLAQ7L513 359 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 TUSC5Q8IXB3 177 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 ACMSDQ8TDX5 336 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 CCDC126Q96EE4 140 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 EGLN2Q96KS0 407 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 L2HGDHQ9H9P8 463 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 BCO1Q9HAY6 547 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 RRAGDQ9NQL2 400 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-210ENST00000464078 CCL27Q9Y4X3 112 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 ACTL7BQ9Y614 415 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 ANK2Q01484 3957 aa15.34■□□□□ 0.05
HMGN1-210ENST00000464078 GOLGA8QA0A0J9YX86 632 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 GOLGA8OA6NCC3 632 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 DPRXA6NFQ7 191 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 GOLGA8NF8WBI6 632 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 GOLGA8RI6L899 631 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 SCDO00767 359 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 NDUFS7O75251 213 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 PRKD3O94806 890 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 F12P00748 615 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 ADAP00813 363 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 YES1P07947 543 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 FAM157CP0CG43 387 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 SUMO3P55854 103 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 ZNF117Q03924 483 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 FAPQ12884 760 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 PDE7AQ13946 482 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 FRMD7Q6ZUT3 714 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 BHLHA15Q7RTS1 189 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 ZNF619Q8N2I2 560 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 SLC43A2Q8N370 569 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 NUP43Q8NFH3 380 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 FBXO30Q8TB52 745 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 CIDECQ96AQ7 238 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 CCT7Q99832 543 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 ALG2Q9H553 416 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 COQ10BQ9H8M1 238 aa15.33■□□□□ 0.04
HMGN1-210ENST00000464078 ACSS1Q9NUB1 689 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-210ENST00000464078 SHISA9B4DS77 424 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 ZNF814B7Z6K7 855 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 PHF1O43189 567 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-210ENST00000464078 EFNA2O43921 213 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 OR3A2P47893 321 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 ZNF385BQ569K4 471 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 C6orf52Q5T4I8 152 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 CCNYL1Q8N7R7 359 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 CEP112Q8N8E3 955 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 COX18Q8N8Q8 333 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 ZFP90Q8TF47 636 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 FCRL1Q96LA6 429 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 BTBD2Q9BX70 525 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms