RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 A0A1W2PQM1 296 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SYNDIG1LA6NDD5 238 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 PATE3B3GLJ2 98 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 FMO6PO60774 539 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 INHBBP09529 407 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 GAS1P54826 345 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 RHAGQ02094 409 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SERTAD2Q14140 314 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 ZNF141Q15928 474 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 HSDL2Q6YN16 418 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SHISA6Q6ZSJ9 500 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 WDR5BQ86VZ2 330 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 CARFQ8N187 725 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 TMEM163Q8TC26 289 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 LGALS12Q96DT0 336 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 ZNF768Q9H5H4 540 aaKnown RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 ZBTB20Q9HC78 741 aaPredicted RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 ZNF304Q9HCX3 659 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 CTSFQ9UBX1 484 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 RPL36Q9Y3U8 105 aaKnown RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 PMF1-BGLAPU3KQ54 211 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 UNC13CQ8NB66 2214 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 DDAH2O95865 285 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 IFI30P13284 250 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 FBLP22087 321 aaKnown RBP11.81□□□□□ -0.52
VAPB-203ENST00000463370 RGS6P49758 472 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 CSTF1Q05048 431 aaKnown RBP11.81□□□□□ -0.52
VAPB-203ENST00000463370 FGFBP1Q14512 234 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SLC25A30Q5SVS4 291 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SLC34A3Q8N130 599 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SLC38A9Q8NBW4 561 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 BBS1Q8NFJ9 593 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 PMM1Q92871 262 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 MVB12AQ96EY5 273 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 OR1F2PQ96R84 312 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 DPYSL5Q9BPU6 564 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 NXF5Q9H1B4 397 aaKnown RBP11.81□□□□□ -0.52
VAPB-203ENST00000463370 OR51E2Q9H255 320 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 HHATLQ9HCP6 504 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SLC22A11Q9NSA0 550 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SIDT1Q9NXL6 827 aaKnown RBP11.81□□□□□ -0.52
VAPB-203ENST00000463370 CARD8Q9Y2G2 431 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 LSM2Q9Y333 95 aaKnown RBP11.81□□□□□ -0.52
VAPB-203ENST00000463370 GNB5O14775 395 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SLC22A1O15245 554 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SURF4O15260 269 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 TIAF1O95411 115 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 IGKV3-11P04433 115 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 ATP12AP54707 1039 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 CCL7P80098 99 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 ARHGAP40Q5TG30 622 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 QSOX2Q6ZRP7 698 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 MED25Q71SY5 747 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 GRAMD2AQ8IUY3 354 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 GATSQ8NAP1 163 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 TOR1AIP2Q8NFQ8 470 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 OR4C6Q8NH72 309 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SLC2A12Q8TD20 617 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 ZNF578Q96N58 590 aaPredicted RBP11.81□□□□□ -0.52
VAPB-203ENST00000463370 IER2Q9BTL4 223 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 NRSN2Q9GZP1 204 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 SERTAD3Q9UJW9 196 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 CDH10Q9Y6N8 788 aa11.81□□□□□ -0.52
VAPB-203ENST00000463370 A0A1B0GX78 115 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 CDC14CA4D256 554 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 EFCAB9A8MZ26 197 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 DSCR3O14972 297 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 AIREO43918 545 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 CNOT3O75175 753 aaKnown RBP11.8□□□□□ -0.52
VAPB-203ENST00000463370 CSO75390 466 aaKnown RBP11.8□□□□□ -0.52
VAPB-203ENST00000463370 CLPXO76031 633 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 CFIP05156 583 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 TBXA2RP21731 343 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 CD226Q15762 336 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 SSX1Q16384 188 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 TSTQ16762 297 aaKnown RBP11.8□□□□□ -0.52
VAPB-203ENST00000463370 PGGHGQ32M88 737 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 ANKDD1AQ495B1 522 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 TMEM71Q6P5X7 295 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 ZNF613Q6PF04 617 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 KIRREL2Q6UWL6 708 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 ZNF367Q7RTV3 350 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 PRR22Q8IZ63 422 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 CADM2Q8N3J6 435 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 OR13C2Q8NGS9 318 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 DYNC2LI1Q8TCX1 351 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 ZNF721Q8TF20 911 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 OSTF1Q92882 214 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 OPALINQ96PE5 141 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 MGLLQ99685 303 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 KLHDC3Q9BQ90 382 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 ZNF559Q9BR84 538 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 G6PC3Q9BUM1 346 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 OR52D1Q9H346 318 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 UBQLN3Q9H347 655 aa11.8□□□□□ -0.52
VAPB-203ENST00000463370 TMEM27Q9HBJ8 222 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms