RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KATNB1Q9BVA0 655 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 ABCB9Q9NP78 766 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 HRASLS2Q9NWW9 162 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 TOR4AQ9NXH8 423 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 CSNK1G3Q9Y6M4 447 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 LINC00854A0A1B0GVQ3 168 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 TCRBV21S2A2A0A5A6 115 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 J3QRE1 110 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 FMO6PO60774 539 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CT62P0C5K7 136 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 MAKP20794 623 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 PTNP21246 168 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 AZGP1P25311 298 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 LTBRP36941 435 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 RFX2P48378 723 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 EOGTQ5NDL2 527 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 LSRQ86X29 649 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CPOQ8IVL8 374 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 ZNF655Q8N720 491 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 SYT14Q8NB59 555 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 PMM1Q92871 262 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 ANKRD9Q96BM1 317 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CTHRC1Q96CG8 243 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 PHOX2BQ99453 314 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 RERGLQ9H628 205 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 SIDT1Q9NXL6 827 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 NPIPA5A0A0B4J1W7 369 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 NPIPA7E9PJI5 369 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 SOCS6O14544 535 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 NPIPA8P0DM63 369 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 GAAP10253 952 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 GCGRP47871 477 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 RACK1P63244 317 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 EXOSC7Q15024 291 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CDK10Q15131 360 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 BAK1Q16611 211 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CLPPQ16740 277 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 KLHL36Q8N4N3 616 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CSNK1A1LQ8N752 337 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 ZFP41Q8N8Y5 198 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 OR52N1Q8NH53 320 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 DPH1Q9BZG8 443 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 OR52D1Q9H346 318 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 TRPV5Q9NQA5 729 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
SEMA3B-209ENST00000456560 SEMA4FO95754 770 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 AK1P00568 194 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 RABIFP47224 123 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 PLAURQ03405 335 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 FZD5Q13467 585 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 TBRG1Q3YBR2 411 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 CXXC5Q7LFL8 322 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 ARIH2OSQ8N7S6 290 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 TMEM239Q8WW34 195 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 HOXB13Q92826 284 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 ENKD1Q9H0I2 346 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 C8orf33Q9H7E9 229 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 H2AFY2Q9P0M6 372 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 GSTK1Q9Y2Q3 226 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 A0A1W2PQL4 384 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 GXYLT2A0PJZ3 443 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 BHLHE40O14503 412 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 BRINP1O60477 761 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 CELA2BP08218 269 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 TBXA2RP21731 343 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 FIGNL1Q6PIW4 674 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 SLC37A2Q8TED4 501 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 HS6ST2Q96MM7 605 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 GSDMCQ9BYG8 508 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 C20orf141Q9NUB4 165 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 BOLA1Q9Y3E2 137 aa17.04■□□□□ 0.32
SEMA3B-209ENST00000456560 KIR2DS5A0A0G2JLQ3 304 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 A0A0G2JNG1 304 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 MEIOCA2RUB1 952 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 KIR2DS3K7RE56 304 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 TFECO14948 347 aaPredicted RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 HCRTR1O43613 425 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 SCO2O43819 266 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 IGHV4-34P06331 123 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 IL7P13232 177 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 IFI30P13284 250 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 FUT1P19526 365 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 GABRA3P34903 492 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 PPP1CAP62136 330 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 POU6F2P78424 691 aaPredicted RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 EIF2B5Q13144 721 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 KIR2DS5Q14953 304 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 TAB1Q15750 504 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 CCDC85BQ15834 202 aaPredicted RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 SPRYD4Q8WW59 207 aaPredicted RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 DCLRE1CQ96SD1 692 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 SECISBP2Q96T21 854 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 CD180Q99467 661 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 COQ7Q99807 217 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 TTYH2Q9BSA4 534 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 ATP13A2Q9NQ11 1180 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 POLE3Q9NRF9 147 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 STARD5Q9NSY2 213 aa17.03■□□□□ 0.32
SEMA3B-209ENST00000456560 TNFRSF10DQ9UBN6 386 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms