RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 DUSP7Q16829 419 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 TCTE1Q5JU00 501 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 NRMQ8IXM6 262 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 TTTY10Q9BZA0 68 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 GABARAPL1Q9H0R8 117 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 C19orf12Q9NSK7 152 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
ITGB4-202ENST00000449880 RHOP08100 348 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 PSMB1P20618 241 aaKnown RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CRYZQ08257 329 aaKnown RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 SHFQ7M4L6 423 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 GPR148Q8TDV2 347 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 BTF3L4Q96K17 158 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ATOH8Q96SQ7 321 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ACTRT3Q9BYD9 372 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CA5BQ9Y2D0 317 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 V9GY05 133 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 GGT3PA6NGU5 568 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CCNOP22674 350 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 OR52E2Q8NGJ4 325 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 MAL2Q969L2 176 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 MVB12BQ9H7P6 319 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 POT1Q9NUX5 634 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 DNMT3AQ9Y6K1 912 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 PHIPQ8WWQ0 1821 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CAMK2DQ13557 499 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 SUSD1Q6UWL2 747 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 GLB1L2Q8IW92 636 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 C1QTNF2Q9BXJ5 285 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 COPS3Q9UNS2 423 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 LEFTY1O75610 366 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 STC2O76061 302 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 NDUFB2O95178 105 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 APBB3O95704 486 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 S100A11P31949 105 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 VSX2P58304 361 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 PPA1Q15181 289 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 TMEM225Q6GV28 225 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 LYPD4Q6UWN0 246 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 DEFB119Q8N690 84 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 STEAP2Q8NFT2 490 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 OR51A7Q8NH64 312 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 DEFB126Q9BYW3 111 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF701Q9NV72 531 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 SHANK3Q9BYB0 1731 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 IDH3GP51553 393 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ALG10BQ5I7T1 473 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 COMMD6Q7Z4G1 85 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CPOQ8IVL8 374 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 CCDC116Q8IYX3 515 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF283Q8N7M2 679 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 SAP130Q9H0E3 1048 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
ITGB4-202ENST00000449880 PLAGL1Q9UM63 463 aa13.11□□□□□ -0.31
ITGB4-202ENST00000449880 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SHOXO15266 292 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 LDB2O43679 373 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 FZD7O75084 574 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF84P51523 738 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 C3orf33Q6P1S2 294 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 MEPCEQ7L2J0 689 aaKnown RBP13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SCD5Q86SK9 330 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ASPGQ86U10 573 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 DAZLQ92904 295 aaKnown RBP13.1□□□□□ -0.31
ITGB4-202ENST00000449880 BMFQ96LC9 184 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 C10orf90Q96M02 699 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 PTCHD1Q96NR3 888 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SMCO4Q9NRQ5 59 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 DUX1O43812 170 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 FCER2P06734 321 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SUOXP51687 545 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 PSPHP78330 225 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 IL22RA1Q8N6P7 574 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ADAMTS18Q8TE60 1221 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms