RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 WDR41Q9HAD4 459 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 IL1RL2Q9HB29 575 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ANKHQ9HCJ1 492 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 LYRM4Q9HD34 91 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 SIRT3Q9NTG7 399 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 MRGBPQ9NV56 204 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 IRAK4Q9NWZ3 460 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 LYARQ9NX58 379 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CMTM6Q9NX76 183 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PLA2G3Q9NZ20 509 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 VAPAQ9P0L0 249 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 SH3BP4Q9P0V3 963 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PTGFRNQ9P2B2 879 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TEKT2Q9UIF3 430 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NXT1Q9UKK6 140 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NPIPA1Q9UND3 350 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 WBP11Q9Y2W2 641 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NDUFAF1Q9Y375 327 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 HS3ST3B1Q9Y662 390 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 MAU2Q9Y6X3 613 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PRKDCP78527 4128 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TENM3Q9P273 2699 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 HEATR5BQ9P2D3 2071 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 A0A088AWK7 358 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 A0A096LPI6 279 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 A0A1B0GX78 115 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 A0A1W2PRB8 838 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 C1orf226A1L170 272 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PRORSD1PA6NEY8 169 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 TRIM64A6NGJ6 449 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 TRIM64BA6NI03 449 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MYO1GB0I1T2 1018 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 H0YIG0 161 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 RNASET2O00584 256 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 NME4O00746 187 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 DSCR3O14972 297 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 ANGPT2O15123 496 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 GYG2O15488 501 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PDPK1O15530 556 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PRODHO43272 600 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 HNRNPCL1O60812 293 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CNOT3O75175 753 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PDE5AO76074 875 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 BMP10O95393 424 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CPSF4O95639 269 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 WDPCPO95876 746 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 SERPINA7P05543 415 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 KRT16P08779 473 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 C8orf89P0DMQ9 161 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 NR2F6P10588 404 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 NQO1P15559 274 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PPP2R1BP30154 601 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PTGS2P35354 604 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CDK9P50750 372 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 GZMMP51124 257 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 SLC7A2P52569 658 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MVDP53602 400 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MTPNP58546 118 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 GPR85P60893 370 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 HBA1P69905 142 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 BTG2P78543 158 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MXRA7P84157 204 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 ID2Q02363 134 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CEACAM7Q14002 265 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 HEPACAMQ14CZ8 416 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 LTB4RQ15722 352 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MAPKAPK3Q16644 382 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 TRMT5Q32P41 509 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 SLC25A35Q3KQZ1 300 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MMEL1Q495T6 779 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 RUNDC3AQ59EK9 446 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 RABL3Q5HYI8 236 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 LRIF1Q5T3J3 769 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 ABHD17BQ5VST6 288 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 OR52E8Q6IFG1 317 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 NANOGP8Q6NSW7 305 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 TLDC1Q6P9B6 456 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 PGM2L1Q6PCE3 622 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 DGAT2L6Q6ZPD8 337 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MSANTD1Q6ZTZ1 278 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 R3HCC1LQ7Z5L2 792 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CCDC71Q8IV32 467 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 ZC3H7AQ8IWR0 971 aaKnown RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 SCUBE1Q8IWY4 988 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 SLC15A3Q8IY34 581 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 FAM9CQ8IZT9 166 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 OR51Q1Q8NH59 317 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 SGMS2Q8NHU3 365 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 DOK4Q8TEW6 326 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM125Q96AQ2 219 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 ROPN1LQ96C74 230 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 KLHL29Q96CT2 875 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 MMABQ96EY8 250 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 AURKBQ96GD4 344 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CDRT15Q96T59 188 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 CGREF1Q99674 301 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 THTPAQ9BU02 230 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 FAIM2Q9BWQ8 316 aa4.37□□□□□ -1.71
PTPN4-206ENST00000441089 JAM3Q9BX67 310 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms