RNA–Protein interactions for RNA: ENST00000433909.2

CCDC189-201, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,157 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-201ENST00000433909 CSPG4Q6UVK1 2322 aa17.45■□□□□ 0.38
CCDC189-201ENST00000433909 FN1P02751 2386 aaKnown RBP17.44■□□□□ 0.38
CCDC189-201ENST00000433909 DNHD1Q96M86 4753 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.44■□□□□ 0.38
CCDC189-201ENST00000433909 PEX11AO75192 247 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 LAMP1P11279 417 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 RNF144AP50876 292 aaPredicted RBP17.44■□□□□ 0.38
CCDC189-201ENST00000433909 STAC2Q6ZMT1 411 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 YTHDF3Q7Z739 585 aaKnown RBP17.44■□□□□ 0.38
CCDC189-201ENST00000433909 STK32CQ86UX6 486 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 TRABD2AQ86V40 505 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 LILRA2Q8N149 483 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 PHOSPHO1Q8TCT1 267 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 OSTF1Q92882 214 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 Q96MF0 132 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 C1orf50Q9BV19 199 aa17.44■□□□□ 0.38
CCDC189-201ENST00000433909 NPIPA5A0A0B4J1W7 369 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 FAM171A2A8MVW0 826 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 NPIPA7E9PJI5 369 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 H7C1Q1 480 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 NUDT14O95848 222 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 TUBBP07437 444 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 LINGO3P0C6S8 592 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 NPIPA8P0DM63 369 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 SFTPDP35247 375 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 EIF1P41567 113 aaKnown RBP17.43■□□□□ 0.38
CCDC189-201ENST00000433909 CCT3P49368 545 aaKnown RBP17.43■□□□□ 0.38
CCDC189-201ENST00000433909 CARD18P57730 90 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ZNF117Q03924 483 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 FOXF1Q12946 379 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 TP53BP2Q13625 1128 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 PTGR1Q14914 329 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 SPDYE7PQ495Y7 208 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ATP6AP1LQ52LC2 224 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 XKR7Q5GH72 579 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 GTF2IRD2BQ6EKJ0 949 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 CDC73Q6P1J9 531 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 PRSS57Q6UWY2 283 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ZCCHC23Q6ZST2 131 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 BEND4Q6ZU67 534 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 MTERF4Q7Z6M4 381 aaKnown RBP17.43■□□□□ 0.38
CCDC189-201ENST00000433909 GTF2IRD2Q86UP8 949 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 WFDC8Q8IUA0 241 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 RIBC1Q8N443 379 aaPredicted RBP17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ZNF527Q8NB42 609 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 OR56A1Q8NGH5 318 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ADAMTS15Q8TE58 950 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ROBO4Q8WZ75 1007 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 OR5P2Q8WZ92 322 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 COX4I2Q96KJ9 171 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ACTRT3Q9BYD9 372 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 ACTR6Q9GZN1 396 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 C12orf49Q9H741 205 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 SLC17A7Q9P2U7 560 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 DSCAMO60469 2012 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 USF3Q68DE3 2245 aa17.43■□□□□ 0.38
CCDC189-201ENST00000433909 KLF4O43474 513 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 SPAG7O75391 227 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 SLU7O95391 586 aaKnown RBP17.42■□□□□ 0.38
CCDC189-201ENST00000433909 HEXAP06865 529 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 PABPC4LP0CB38 370 aaKnown RBP17.42■□□□□ 0.38
CCDC189-201ENST00000433909 SHC1P29353 583 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 AGTR1P30556 359 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 DCST2Q5T1A1 773 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 ZNF704Q6ZNC4 412 aaPredicted RBP17.42■□□□□ 0.38
CCDC189-201ENST00000433909 PLEKHM3Q6ZWE6 761 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 CIARTQ8N365 385 aaPredicted RBP17.42■□□□□ 0.38
CCDC189-201ENST00000433909 FBXO27Q8NI29 283 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 PPP1R14CQ8TAE6 165 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 REXO5Q96IC2 774 aaKnown RBP17.42■□□□□ 0.38
CCDC189-201ENST00000433909 HOXD1Q9GZZ0 328 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 CXorf36Q9H7Y0 433 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 ATAD3AQ9NVI7 634 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 FAF1Q9UNN5 650 aaPredicted RBP17.42■□□□□ 0.38
CCDC189-201ENST00000433909 CARD8Q9Y2G2 431 aa17.42■□□□□ 0.38
CCDC189-201ENST00000433909 PRR14LQ5THK1 2151 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 H3BNH8 94 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 SMAD7O15105 426 aaKnown RBP17.41■□□□□ 0.38
CCDC189-201ENST00000433909 OIP5O43482 229 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 LYPLA1O75608 230 aaPredicted RBP17.41■□□□□ 0.38
CCDC189-201ENST00000433909 LY6G6DO95868 133 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 C6orf47O95873 294 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 KRT16P08779 473 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 ELK4P28324 431 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 NR1H2P55055 460 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 ZNF239Q16600 458 aaKnown RBP17.41■□□□□ 0.38
CCDC189-201ENST00000433909 LSM12Q3MHD2 195 aaKnown RBP17.41■□□□□ 0.38
CCDC189-201ENST00000433909 C6orf136Q5SQH8 315 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 IL23RQ5VWK5 629 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 CBLN3Q6UW01 205 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 FNDC5Q8NAU1 212 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 TCP10LQ8TDR4 215 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 ABHD3Q8WU67 409 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 NUDT8Q8WV74 236 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 PLPPR2Q96GM1 343 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 C3orf30Q96M34 536 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 BDH2Q9BUT1 245 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 TIGARQ9NQ88 270 aa17.41■□□□□ 0.38
CCDC189-201ENST00000433909 GPR52Q9Y2T5 361 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms