RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 MAKP20794 623 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 GCGRP47871 477 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 IFITM2Q01629 132 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 FBXO43Q4G163 708 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 VWA2Q5GFL6 755 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 DMRTC1Q5HYR2 192 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 AGAP7PQ5VUJ5 663 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 PLAG1Q6DJT9 500 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 MFSD12Q6NUT3 480 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 FRRS1Q6ZNA5 592 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 VASH1Q7L8A9 365 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 OR52I1Q8NGK6 324 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 OR4C3Q8NH37 302 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 TEX47Q8TBZ9 253 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 PCNPQ8WW12 178 aaKnown RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 ATOH1Q92858 354 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 SLC41A3Q96GZ6 507 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 CRELD1Q96HD1 420 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 CITED4Q96RK1 184 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 SECISBP2Q96T21 854 aaKnown RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 ZFYVE21Q9BQ24 234 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 FBXO8Q9NRD0 319 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 ING1Q9UK53 422 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 ERVK-19Q9WJR5 959 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 MRPS7Q9Y2R9 242 aaKnown RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 OR10H1Q9Y4A9 318 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 PCNX3Q9H6A9 2034 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 IDSB3KWA1 339 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 TSC22D2O75157 780 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 GUCY1B2O75343 617 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 LGI1O95970 557 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 HTR2AP28223 471 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 OR2B6P58173 313 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 SMIM11AP58511 58 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 TUBA1BP68363 451 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 ABATP80404 500 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 BAK1Q16611 211 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 COL13A1Q5TAT6 717 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 ZNF425Q6IV72 752 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 TUBA1AQ71U36 451 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 SLC46A3Q7Z3Q1 461 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 KDM8Q8N371 416 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 MFSD9Q8NBP5 474 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 OR4K13Q8NH42 304 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 C9orf43Q8TAL5 461 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 HSPA12BQ96MM6 686 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 ZNF582Q96NG8 517 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 GFM1Q96RP9 751 aaKnown RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 SDF2Q99470 211 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 CDCA3Q99618 268 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 IFT27Q9BW83 186 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 ANKHQ9HCJ1 492 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 OSGIN1Q9UJX0 560 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 ATXN7L1Q9ULK2 861 aaPredicted RBP7.77□□□□□ -1.17
CD44-208ENST00000428726 MGAT4BQ9UQ53 548 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 SLC6A5Q9Y345 797 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 PCDHGB6Q9Y5F9 930 aa7.77□□□□□ -1.17
CD44-208ENST00000428726 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 IGHV5-51A0A0C4DH38 117 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 FAAHO00519 579 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 WNT1P04628 370 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ZNF24P17028 368 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 AKT2P31751 481 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 CSTF2P33240 577 aaKnown RBP eCLIP7.76□□□□□ -1.17
CD44-208ENST00000428726 UGT2B10P36537 528 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ANXA11P50995 505 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 ARFIP1P53367 373 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 CDH11P55287 796 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 FZD2Q14332 565 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ARMC4Q5T2S8 1044 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 LAPTM4BQ86VI4 370 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SDR9C7Q8NEX9 313 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 GIMAP5Q96F15 307 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 RBM18Q96H35 190 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 SLC38A3Q99624 504 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 LMAN2LQ9H0V9 348 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 TTYH1Q9H313 450 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 PAQR5Q9NXK6 330 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 CNOT2Q9NZN8 540 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 NUFIP1Q9UHK0 495 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 N6AMT1Q9Y5N5 214 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SVILO95425 2214 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 EFCAB10A6NFE3 127 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 METTL15A6NJ78 407 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 E9PI62 339 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 BLOC1S5-TXNDC5H3BN57 136 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 IDH3BO43837 385 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 PPP1R3DO95685 299 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 NUDT14O95848 222 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 TNFP01375 233 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 IGKV1D-16P01601 117 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 CASP3P42574 277 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 OR1D5P58170 312 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 BHLHB9Q6PI77 547 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ARL9Q6T311 187 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ESPNLQ6ZVH7 1005 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SCAIQ8N9R8 606 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 MORN4Q8NDC4 146 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms