RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 HPNP05981 417 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 ENDOUP21128 410 aaKnown RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 PRDX6P30041 224 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 SRD5A2P31213 254 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 STARP49675 285 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 KCNC4Q03721 635 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 LARS2Q15031 903 aaKnown RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 MAPK11Q15759 364 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ZNF311Q5JNZ3 666 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 WLSQ5T9L3 541 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 KRT73Q86Y46 540 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 FITM2Q8N6M3 262 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 FADS6Q8N9I5 356 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 C11orf65Q8NCR3 313 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 OR8J3Q8NGG0 315 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 SMPDL3BQ92485 455 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 SARAFQ96BY9 339 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 C1GALT1C1Q96EU7 318 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 KAT8Q9H7Z6 458 aaKnown RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 RLIMQ9NVW2 624 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ADA2Q9NZK5 511 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 SPRR3Q9UBC9 169 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 TAGLN3Q9UI15 199 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 TINAGQ9UJW2 476 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ANGPT4Q9Y264 503 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 B4DXG7 233 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 FXYD1O00168 92 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ADAM10O14672 748 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 LRRTM2O43300 516 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 EIF4E2O60573 245 aaKnown RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 IGHG3P01860 377 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 OPN1LWP04000 364 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ARAFP10398 606 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 BMP2P12643 396 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 P2RX1P51575 399 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ADRM1Q16186 407 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 C3AR1Q16581 482 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 GXYLT1Q4G148 440 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 AAGABQ6PD74 315 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 POMZP3Q6PJE2 187 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 FGD2Q7Z6J4 655 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 UBQLNLQ8IYU4 475 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 HIPK4Q8NE63 616 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ATP6V1C2Q8NEY4 427 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ZNF563Q8TA94 476 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 BBS10Q8TAM1 723 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 CNOT9Q92600 299 aaKnown RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 NTNG2Q96CW9 530 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ZNF607Q96SK3 696 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 HOPXQ9BPY8 73 aaPredicted RBP13.22□□□□□ -0.29
SGCE-204ENST00000428696 ARMC7Q9H6L4 198 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 PNPLA3Q9NST1 481 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 SLC35A3Q9Y2D2 325 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 H3BML4 177 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 CCL21O00585 134 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 AQP7O14520 342 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 GSTA4O15217 222 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 BCAS1O75363 584 aaPredicted RBP13.21□□□□□ -0.3
SGCE-204ENST00000428696 SERPINB7O75635 380 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 GUSBP08236 651 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 BMP7P18075 431 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 SLC7A2P52569 658 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 PSME3P61289 254 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 CBFBQ13951 182 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 FGFBP1Q14512 234 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 LIN52Q52LA3 116 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.3
SGCE-204ENST00000428696 SERPINA11Q86U17 422 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 CD163Q86VB7 1156 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 FJX1Q86VR8 437 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 PTOV1Q86YD1 416 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 DOLPP1Q86YN1 238 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 OR5W2Q8NH69 310 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 FAM57AQ8TBR7 257 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 SLC26A7Q8TE54 656 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 PMM1Q92871 262 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 NSL1Q96IY1 281 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 KLHDC3Q9BQ90 382 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 PIGQQ9BRB3 760 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 SPATA5L1Q9BVQ7 753 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 LAT2Q9GZY6 243 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 TMEM38AQ9H6F2 299 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 MED17Q9NVC6 651 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 SUCOQ9UBS9 1254 aaKnown RBP13.21□□□□□ -0.3
SGCE-204ENST00000428696 SLC13A4Q9UKG4 626 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 USP22Q9UPT9 525 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 ZNF443Q9Y2A4 671 aaPredicted RBP13.21□□□□□ -0.3
SGCE-204ENST00000428696 IFT52Q9Y366 437 aa13.21□□□□□ -0.3
SGCE-204ENST00000428696 EXPH5Q8NEV8 1989 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 BCKDKO14874 412 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 NID1P14543 1247 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 PGM1P36871 562 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 LIPEQ05469 1076 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 RBBP4Q09028 425 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms