RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PKNOX1P55347 436 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 C2orf80Q0P641 193 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 PPA1Q15181 289 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 ZNF678Q5SXM1 525 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 C1QTNF12Q5T7M4 302 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 LCA5Q86VQ0 697 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 TUSC5Q8IXB3 177 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 LILRA2Q8N149 483 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 MMGT1Q8N4V1 131 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 CDRT4Q8N9R6 151 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 OR4C3Q8NH37 302 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 CEP70Q8NHQ1 597 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 NPAS1Q99742 590 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 UBQLN4Q9NRR5 601 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 KLHL9Q9P2J3 617 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 ZNF180Q9UJW8 692 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 ARFGEF3Q5TH69 2177 aa13.78□□□□□ -0.2
RPUSD3-204ENST00000424438 GXYLT2A0PJZ3 443 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 LMX1BO60663 402 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 RAMP1O60894 148 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 INHBAP08476 426 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 PRPS2P11908 318 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 TSPAN8P19075 237 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 TTKP33981 857 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 GZMKP49863 264 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 SUMO3P55854 103 aaPredicted RBP13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 UAP1Q16222 522 aaPredicted RBP13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 PRSS53Q2L4Q9 553 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 UNC50Q53HI1 259 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 ZCCHC12Q6PEW1 402 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 Q6ZSR9 355 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 FCRLAQ7L513 359 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 MTERF4Q7Z6M4 381 aaKnown RBP13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 SLC9A6Q92581 669 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 DHRS9Q9BPW9 319 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 CACNG6Q9BXT2 260 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 PLA2G12AQ9BZM1 189 aa13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 IQCGQ9H095 443 aaKnown RBP13.77□□□□□ -0.21
RPUSD3-204ENST00000424438 SUPT7LO94864 414 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 IGHV4-31P0DP07 118 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 SRD5A1P18405 259 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 TAC1P20366 129 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 PTAFRP25105 342 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 HTR6P50406 440 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 C21orf58P58505 322 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 RAC3P60763 192 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 LCP2Q13094 533 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 TSC22D1Q15714 1073 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 ARL13AQ5H913 290 aaPredicted RBP13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 EXOSC6Q5RKV6 272 aaKnown RBP13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 LIPNQ5VXI9 398 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF544Q6NX49 715 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 BHLHB9Q6PI77 547 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 B4GALNT2Q8NHY0 566 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 GPR151Q8TDV0 419 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 C10orf105Q8TEF2 133 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 FAM168AQ92567 244 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 MRRFQ96E11 262 aaKnown RBP13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 SRXN1Q9BYN0 137 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 COQ10BQ9H8M1 238 aa13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 ING1Q9UK53 422 aaPredicted RBP13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 GPC6Q9Y625 555 aaPredicted RBP13.76□□□□□ -0.21
RPUSD3-204ENST00000424438 MEGF8Q7Z7M0 2845 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 OR5H1A6NKK0 313 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF724A8MTY0 619 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 NPIPB8E9PQR5 432 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 H3BQF6 201 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 ETV2O00321 342 aaPredicted RBP13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 ABCD4O14678 606 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 TBX19O60806 448 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 KCNK2O95069 426 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 NTN1O95631 604 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 IMPDH1P20839 514 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 RFX3P48380 749 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 SERPINB4P48594 390 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 RAB35Q15286 201 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 SLC25A53Q5H9E4 307 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 TMEM108Q6UXF1 575 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF619Q8N2I2 560 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 L3HYPDHQ96EM0 354 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 GIMAP5Q96F15 307 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 PSD2Q9BQI7 771 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 EBPLQ9BY08 206 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 TMEM185BQ9H7F4 350 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 ZDHHC18Q9NUE0 388 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 GIN1Q9NXP7 522 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 NPAP1Q9NZP6 1156 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 MGAM2Q2M2H8 2515 aa13.75□□□□□ -0.21
RPUSD3-204ENST00000424438 E7EQL1 145 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 SCDO00767 359 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF195O14628 629 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 EFNA2O43921 213 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 OPN1LWP04000 364 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms