RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TVP23BQ9NYZ1 205 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 FLRT3Q9NZU0 649 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 CNIH4Q9P003 139 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 KLHL3Q9UH77 587 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 CBLCQ9ULV8 474 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 DIMT1Q9UNQ2 313 aaKnown RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PCDHGA3Q9Y5H0 932 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 A0A1B0GWA3 101 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 FRG2CA6NGY1 282 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 UNC119BA6NIH7 251 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 C17orf105B2RV13 164 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 CDC42EP2O14613 210 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 POLR1CO15160 346 aaPredicted RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 TO15178 435 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 SURF4O15260 269 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 CNOT3O75175 753 aaKnown RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 CLPXO76031 633 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 NTN1O95631 604 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 IL33O95760 270 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 PDGFBP01127 241 aaPredicted RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 IGF2P01344 180 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 HMGN1P05114 100 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 CD36P16671 472 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 CSTF2P33240 577 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 UGT2B10P36537 528 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 GPR4P46093 362 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 EFNA3P52797 238 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 FXYD6P3P58550 94 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 DCAF7P61962 342 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 DCTN2Q13561 401 aaKnown RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 SNAPC1Q16533 368 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 KLHL26Q53HC5 615 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 AADACL4Q5VUY2 407 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 RHBDD2Q6NTF9 364 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 COX15Q7KZN9 410 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 RABEPKQ7Z6M1 372 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 SLITRK4Q8IW52 837 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 Q8N9G6 341 aaPredicted RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 PROKR2Q8NFJ6 384 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 OR4D9Q8NGE8 314 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 OR4Q3Q8NH05 313 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 OR14A16Q8NHC5 309 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 DYNC2LI1Q8TCX1 351 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF721Q8TF20 911 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 NAT6Q93015 286 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 TSLPQ969D9 159 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 ADIPOR1Q96A54 375 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 VMP1Q96GC9 406 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 SENP5Q96HI0 755 aaPredicted RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 PTCHD1Q96NR3 888 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 JAM3Q9BX67 310 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 HOXD1Q9GZZ0 328 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 FN3KQ9H479 309 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 TMEM27Q9HBJ8 222 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 CAPN10Q9HC96 672 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF304Q9HCX3 659 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 EXOSC3Q9NQT5 275 aaKnown RBP8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 FGF21Q9NSA1 209 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 TBC1D23Q9NUY8 699 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 SERTAD3Q9UJW9 196 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC35A3Q9Y2D2 325 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 MAU2Q9Y6X3 613 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 DNAH14Q0VDD8 3507 aa8.35□□□□□ -1.07
LINCMD1-201ENST00000418518 HTR3EA5X5Y0 456 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR2W5A6NFC9 320 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SERINC4A6NH21 518 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR6C76A6NM76 312 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SNTNA6NMZ2 147 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 BHLHE40O14503 412 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 LAMTOR5O43504 91 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SIGLEC6O43699 453 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 TLX2O43763 284 aaPredicted RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 DYRK3O43781 588 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ADAM11O75078 769 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 RCBTB2O95199 551 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 IFNA16P05015 189 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SCG5P05408 212 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 NGFRP08138 427 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ZGLP1P0C6A0 271 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 MAKP20794 623 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 TBXA2RP21731 343 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR1D4P47884 311 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 PPM1FP49593 454 aaPredicted RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 PSPHP78330 225 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ACY1Q03154 408 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 RAB40BQ12829 278 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 FOXD4Q12950 439 aaPredicted RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 MOGQ16653 247 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 HLA-BQ31612 363 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 KLHL22Q53GT1 634 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ARMCX4Q5H9R4 360 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ARHGAP40Q5TG30 622 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 GUSBP11Q6P575 273 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF574Q6ZN55 896 aaPredicted RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 TMPRSS9Q7Z410 1059 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 TMEM151BQ8IW70 566 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 CYP4Z2PQ8N1L4 340 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms