RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 OXSR1O95747 527 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 PTTG1O95997 202 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 NGFP01138 241 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 IGHV4-59P01825 116 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KRT6AP02538 564 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KRT6BP04259 564 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 FYNP06241 537 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 FGF4P08620 206 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CFC1BP0CG36 223 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CFC1P0CG37 223 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 STAG3L1P0CL83 205 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 THRBP10828 461 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 HAPLN1P10915 354 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 GOT1P17174 413 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ERCC2P18074 760 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 LBPP18428 481 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CYP2B6P20813 491 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 IMPDH1P20839 514 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ATP6V1B2P21281 511 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ACHEP22303 614 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GPX3P22352 226 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CA6P23280 308 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CRHBPP24387 322 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 TCF7P36402 384 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 HPCAL1P37235 193 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GRIA1P42261 906 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 MATKP42679 507 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 LHX1P48742 406 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ASCL1P50553 236 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 NDST1P52848 882 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 LIMK1P53667 647 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RAD23AP54725 363 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GEMP55040 296 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KCNK10P57789 538 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 B3GALT5-AS1P59052 145 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 DEFA1P59665 94 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 DEFA3P59666 94 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 C1QTNF8P60827 252 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CXCR4P61073 352 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 HERV-K104P61576 105 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CSNK2BP67870 215 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ACSM1Q08AH1 577 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ZNF415Q09FC8 603 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 LAMTOR4Q0VGL1 99 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 SELPLGQ14242 412 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 TMEM132DQ14C87 1099 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 P2RY6Q15077 328 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KCNJ8Q15842 424 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 NEDD8Q15843 81 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CA9Q16790 459 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 PHKG1Q16816 387 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CYP51A1Q16850 503 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 DCAF4L1Q3SXM0 396 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 SLC25A52Q3SY17 297 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ANKDD1AQ495B1 522 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CYBRD1Q53TN4 286 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 BSPRYQ5W0U4 402 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KCTD11Q693B1 232 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 FAM53AQ6NSI3 398 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 ARHGAP11AQ6P4F7 1023 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 METTL7BQ6UX53 244 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 PLEKHG7Q6ZR37 379 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ARMCX2Q7L311 632 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 SLC16A9Q7RTY1 509 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 BNIPLQ7Z465 357 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 NANOGNBQ7Z5D8 188 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ADCK1Q86TW2 530 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RTN4RL2Q86UN3 420 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 AKAP14Q86UN6 197 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ITIH5Q86UX2 942 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CDR2LQ86X02 465 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 LRRC49Q8IUZ0 686 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 MMAAQ8IVH4 418 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 CENPLQ8N0S6 344 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 LGI2Q8N0V4 545 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CLYBLQ8N0X4 340 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 EID3Q8N140 333 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ZNF567Q8N184 647 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ZCCHC7Q8N3Z6 543 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 ZNF843Q8N446 348 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 LRRC52Q8N7C0 313 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RNF148Q8N7C7 305 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CCNYL1Q8N7R7 359 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ZNF611Q8N823 705 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RNF149Q8NC42 400 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CCNYQ8ND76 341 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KBTBD8Q8NFY9 601 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 OR7A2PQ8NGA2 310 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 OR52E4Q8NGH9 312 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 OR52K1Q8NGK4 314 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GRPEL2Q8TAA5 225 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 UBA3Q8TBC4 463 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 AGR3Q8TD06 166 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 MAGEE2Q8TD90 523 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 RNF139Q8WU17 664 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KCTD4Q8WVF5 259 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 SEPT1Q8WYJ6 367 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ROBO4Q8WZ75 1007 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 FCGR1BQ92637 280 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 PEX13Q92968 403 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms