RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TMEM135Q86UB9 458 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 IL17RDQ8NFM7 739 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ISG20Q96AZ6 181 aaKnown RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ARNT2Q9HBZ2 717 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 EDARQ9UNE0 448 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 LOC105369274A0A096LPK9 316 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 HEXAP06865 529 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 EN2P19622 333 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 OR4N4Q8N0Y3 316 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 PTBP2Q9UKA9 531 aaKnown RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 HSPB6O14558 160 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 HPRP00739 348 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 IGHEP01854 428 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 GNB3P16520 340 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 RAB15P59190 212 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 PCGF3Q3KNV8 242 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 LETMD1Q6P1Q0 360 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 NAGSQ8N159 534 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SDR9C7Q8NEX9 313 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TCTN2Q96GX1 697 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SORBS1Q9BX66 1292 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MED16Q9Y2X0 877 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 AQP9O43315 295 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 PVRP15151 417 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 HTR2AP28223 471 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 PIP5KL1Q5T9C9 394 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TLDC1Q6P9B6 456 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MFSD6LQ8IWD5 586 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SLC39A11Q8N1S5 342 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CHCHD4Q8N4Q1 142 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TAAR8Q969N4 342 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TRMT2BQ96GJ1 504 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 FER1L6-AS2Q96M78 137 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 LIN28AQ9H9Z2 209 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 RDH14Q9HBH5 336 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 EIF3FO00303 357 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 UGDHO60701 494 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MTHFD2P13995 350 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CSNK1EP49674 416 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 FOXN4Q96NZ1 517 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 NUDT22Q9BRQ3 303 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SCN3AQ9NY46 2000 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TRAV18A0A075B6X5 111 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TRAPPC2LH3BP13 241 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 F10P00742 488 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 AGTR1P30556 359 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CNR2P34972 360 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 GJA5P36382 358 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MAP2K3P46734 347 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 HTR3DQ70Z44 454 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 RHBDF1Q96CC6 855 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 INTS14Q96SY0 518 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 GMLQ99445 158 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 BTAF1O14981 1849 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 C1orf105O95561 183 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 IGHG1P01857 330 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 LINC00696Q6ZRV3 163 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MEX3DQ86XN8 651 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MALSU1Q96EH3 234 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 ZC3HAV1LQ96H79 300 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 ARL6Q9H0F7 186 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM9Q9P0T7 183 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 KDM4EB2RXH2 506 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CASC3O15234 703 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 OR2T1O43869 369 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 PRKYO43930 277 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 KCNK5O95279 499 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 EIF4EP06730 217 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 PTGER1P34995 402 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 DCDP81605 110 aaKnown RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 FAM78AQ5JUQ0 283 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MOB3CQ70IA8 216 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 MARVELD2Q8N4S9 558 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 OR9Q2Q8NGE9 314 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 FAM210AQ96ND0 272 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SNX18Q96RF0 628 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CCDC106Q9BWC9 280 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 KLF16Q9BXK1 252 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 SLC46A2Q9BY10 475 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CCM2LQ9NUG4 571 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 CSNK1G3Q9Y6M4 447 aa10.55□□□□□ -0.72
PTCH1-205ENST00000418258 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-205ENST00000418258 B4DXG7 233 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 IFNA17P01571 189 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ARSBP15848 533 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 EFNA3P52797 238 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 RTL10Q7L3V2 364 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 MINDY1Q8N5J2 469 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 CARD8Q9Y2G2 431 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PCDHGA1Q9Y5H4 931 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TRIP12Q14669 1992 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 MEGF11A6BM72 1044 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 SERPINA2P20848 420 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TSFMP43897 325 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms