RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TP53INP1Q96A56 240 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 WWTR1Q9GZV5 400 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 MMP27Q9H306 513 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 KAT8Q9H7Z6 458 aaKnown RBP13.4□□□□□ -0.26
SGCE-202ENST00000415788 ANKRA2Q9H9E1 313 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 OSGIN1Q9UJX0 560 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 TESMINQ9Y4I5 508 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 PMF1-BGLAPU3KQ54 211 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 PCSK5Q92824 1860 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 C2orf92A0A1B0GVN3 265 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 MASP2O00187 686 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 CXCR6O00574 342 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 RGS13O14921 159 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 KRT75O95678 551 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 CELA2AP08217 269 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 PTPN6P29350 595 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 NPTX1Q15818 432 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 CRB2Q5IJ48 1285 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 SLX4IPQ5VYV7 408 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 MFSD12Q6NUT3 480 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 ENPP6Q6UWR7 440 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 CDRT4Q8N9R6 151 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 SIMC1Q8NDZ2 872 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 OR5AK3PQ8NH89 298 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 BRIX1Q8TDN6 353 aaKnown RBP13.4□□□□□ -0.26
SGCE-202ENST00000415788 IPCEF1Q8WWN9 437 aaPredicted RBP13.4□□□□□ -0.26
SGCE-202ENST00000415788 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 VSTM2LQ96N03 204 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 CNTNAP3BQ96NU0 1288 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 BTBD2Q9BX70 525 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 CNTNAP3Q9BZ76 1288 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 SLIRPQ9GZT3 109 aaKnown RBP13.4□□□□□ -0.26
SGCE-202ENST00000415788 FOLH1BQ9HBA9 442 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 DCAF13Q9NV06 445 aaKnown RBP13.4□□□□□ -0.26
SGCE-202ENST00000415788 MYOTQ9UBF9 498 aa13.4□□□□□ -0.26
SGCE-202ENST00000415788 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 CDK2AP1O14519 115 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 ASNA1O43681 348 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 CEACAM4O75871 244 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 PTTG1O95997 202 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 PPICP45877 212 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 CCL11P51671 97 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 ZNF155Q12901 538 aaPredicted RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 ATAD3BQ5T9A4 648 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 SHQ1Q6PI26 577 aaKnown RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 RPS19BP1Q86WX3 136 aaKnown RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 MICU2Q8IYU8 434 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 PSMF1Q92530 271 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 HOXB13Q92826 284 aaPredicted RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 ZNF354BQ96LW1 612 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 GAL3ST4Q96RP7 486 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 APOL4Q9BPW4 351 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 LMF2Q9BU23 707 aaKnown RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 ITPAQ9BY32 194 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 ACTRT3Q9BYD9 372 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 HOXD1Q9GZZ0 328 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 TPK1Q9H3S4 243 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 GPATCH2Q9NW75 528 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 ERVK-18Q9QC07 812 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 TMEFF2Q9UIK5 374 aaPredicted RBP13.39□□□□□ -0.27
SGCE-202ENST00000415788 PCDHB14Q9Y5E9 798 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 FREM2Q5SZK8 3169 aa13.39□□□□□ -0.27
SGCE-202ENST00000415788 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 FRG2CA6NGY1 282 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 DUXAA6NLW8 204 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 RGS10O43665 173 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ALPPP05187 535 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 HOXB9P17482 250 aaPredicted RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 DRD5P21918 477 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ANXA11P50995 505 aaKnown RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 IST1P53990 364 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 VBP1P61758 197 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 CSNK2BP67870 215 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 LASP1Q14847 261 aaKnown RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 GPR155Q7Z3F1 870 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 LYSMD2Q8IV50 215 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 TAGAPQ8N103 731 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 FAM86B1Q8N7N1 296 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ZNF441Q8N8Z8 693 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 MCFD2Q8NI22 146 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 FCGR1BQ92637 280 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ADIPOR1Q96A54 375 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 LGALS12Q96DT0 336 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 LCORQ96JN0 433 aaPredicted RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 AGAP4Q96P64 663 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 PRORYQ9H606 182 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 TPT1P8Q9HAU6 139 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 SLC6A13Q9NSD5 602 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 GPR83Q9NYM4 423 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ABI3Q9P2A4 366 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 CORO2BQ9UQ03 480 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms