RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TRDNQ13061 729 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 ILKQ13418 452 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 GCKRQ14397 625 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 STK38Q15208 465 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 SLC5A12Q1EHB4 618 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 SLC25A52Q3SY17 297 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 TP53I3Q53FA7 332 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 UNC50Q53HI1 259 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 TEX44Q53QW1 395 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 HSP90AA4PQ58FG1 418 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 MLIPQ5VWP3 458 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 PDPK2PQ6A1A2 396 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 APTXQ7Z2E3 356 aaKnown RBP4.2□□□□□ -1.74
LSM5-205ENST00000409952 MFSD6LQ8IWD5 586 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 SLC35F2Q8IXU6 374 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 SYCE1Q8N0S2 351 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 FBXL16Q8N461 479 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 OR9Q2Q8NGE9 314 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 ACMSDQ8TDX5 336 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 PAQR8Q8TEZ7 354 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 AENQ8WTP8 325 aaKnown RBP4.2□□□□□ -1.74
LSM5-205ENST00000409952 PIBF1Q8WXW3 757 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.2□□□□□ -1.74
LSM5-205ENST00000409952 RAB1CQ92928 201 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 CIDECQ96AQ7 238 aaPredicted RBP4.2□□□□□ -1.74
LSM5-205ENST00000409952 NUS1Q96E22 293 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 TIMD4Q96H15 378 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 ZBED3Q96IU2 234 aaPredicted RBP4.2□□□□□ -1.74
LSM5-205ENST00000409952 SLITRK2Q9H156 845 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 IKZF5Q9H5V7 419 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 ATP13A3Q9H7F0 1226 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 PLEKHA3Q9HB20 300 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 LYRM4Q9HD34 91 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 MTCH1Q9NZJ7 389 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 RCOR3Q9P2K3 495 aaPredicted RBP4.2□□□□□ -1.74
LSM5-205ENST00000409952 FAF1Q9UNN5 650 aaPredicted RBP4.2□□□□□ -1.74
LSM5-205ENST00000409952 GMPPBQ9Y5P6 360 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 SALL1Q9NSC2 1324 aa4.2□□□□□ -1.74
LSM5-205ENST00000409952 RRP8O43159 456 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 DUSP11O75319 330 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 PDE5AO76074 875 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 YEATS4O95619 227 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 JCHAINP01591 159 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 CLTAP09496 248 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 MYOGP15173 224 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 ATP5A1P25705 553 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 HMGB2P26583 209 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 XGP55808 180 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 RIPPLY1Q0D2K3 151 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 RAB35Q15286 201 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 ETFDHQ16134 617 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 PPP1R3AQ16821 1122 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 CCDC122Q5T0U0 273 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 TWF2Q6IBS0 349 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 PRR5LQ6MZQ0 368 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 DEGS2Q6QHC5 323 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 ENPP6Q6UWR7 440 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 SCARA5Q6ZMJ2 495 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 MOB2Q70IA6 237 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 TUBA1AQ71U36 451 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 VRK2Q86Y07 508 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 METTL27Q8N6F8 245 aaPredicted RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 NRACQ8N912 160 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 OR1B1Q8NGR6 318 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 OR2T11Q8NH01 316 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 RHEBL1Q8TAI7 183 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 MARCH1Q8TCQ1 289 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 MAGEE2Q8TD90 523 aaPredicted RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 DTX3LQ8TDB6 740 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 TOP1MTQ969P6 601 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 FMO2Q99518 471 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 NIPSNAP3BQ9BS92 247 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 BICC1Q9H694 974 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 NMRAL1Q9HBL8 299 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 LYARQ9NX58 379 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 PTTG3PQ9NZH4 202 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 KLK11Q9UBX7 282 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 ANGPTL2Q9UKU9 493 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 AK6Q9Y3D8 172 aaKnown RBP4.19□□□□□ -1.74
LSM5-205ENST00000409952 OARD1Q9Y530 152 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 GRIN2DO15399 1336 aa4.19□□□□□ -1.74
LSM5-205ENST00000409952 ARID2Q68CP9 1835 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 SAA2-SAA4A0A096LPE2 208 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 A0A1B0GUH1 482 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 A0A1W2PPV9 198 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CCDC182A6NF36 153 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 OR6C65A6NJZ3 312 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ZNF724A8MTY0 619 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 C12orf71A8MTZ7 269 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 TEX46H3BTG2 121 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 SOCS2O14508 198 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ZNF195O14628 629 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 INPP4BO15327 924 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CLOCKO15516 846 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 TNFSF12O43508 249 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CABYRO75952 493 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 OR2J3O76001 311 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CLPXO76031 633 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 POP4O95707 220 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms