RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 EPHA2P29317 976 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TPD52P55327 224 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 ADARB1P78563 741 aaKnown RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TRAM2Q15035 370 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 FCRLBQ6BAA4 426 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF730Q6ZMV8 503 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 MARCH3Q86UD3 253 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 MARVELD2Q8N4S9 558 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 OR4K5Q8NGD3 323 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TMEM255BQ8WV15 326 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 SH3YL1Q96HL8 342 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 RDH12Q96NR8 316 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 MUS81Q96NY9 551 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 FUZQ9BT04 418 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 POLR1BQ9H9Y6 1135 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 MYOTQ9UBF9 498 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TESQ9UGI8 421 aaKnown RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 CARD8Q9Y2G2 431 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 LOC101059948A0A1B0GTJ6 334 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 TM4SF5O14894 197 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 OIP5O43482 229 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 OR5F1O95221 314 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 UBL4AP11441 157 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 TBXA2RP21731 343 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 STAT5AP42229 794 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 ACAA2P42765 397 aaKnown RBP11.43□□□□□ -0.58
CHMP3-204ENST00000409727 NHLH1Q02575 133 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 IL10RAQ13651 578 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 EXT1Q16394 746 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 RFX4Q33E94 735 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF770Q6IQ21 691 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-204ENST00000409727 CBLN3Q6UW01 205 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 Q6ZPB1 254 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-204ENST00000409727 NDUFAF7Q7L592 441 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 ELP5Q8TE02 316 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 SLC38A4Q969I6 547 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 IMMP1LQ96LU5 166 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 TBL1XR1Q9BZK7 514 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 DMXL1Q9Y485 3027 aa11.43□□□□□ -0.58
CHMP3-204ENST00000409727 A0A087WUU8 490 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 LOC100130705A0A1B0GUX0 176 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 TRAPPC13A5PLN9 417 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 H0YAE9 185 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 DLL1O00548 723 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 GNB5O14775 395 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 PPM1BO75688 479 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 IGHEP01854 428 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 CDH2P19022 906 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 CBLP22681 906 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 RBMS1P29558 406 aaKnown RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 EVI2BP34910 448 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 PNLIPRP2P54317 469 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 EPS8Q12929 822 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 SSPNQ14714 243 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 PLAG1Q6DJT9 500 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 PGBD2Q6P3X8 592 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 UGT2A3Q6UWM9 527 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 RRM2BQ7LG56 351 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF550Q7Z398 422 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 GRAMD2AQ8IUY3 354 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 CMIPQ8IY22 773 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 IL22RA1Q8N6P7 574 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 OR8K3Q8NH51 312 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF559Q9BR84 538 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 TMEM27Q9HBJ8 222 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 FBXL4Q9UKA2 621 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 POFUT2Q9Y2G5 429 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 C2orf72A6NCS6 295 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 OR6C70A6NIJ9 312 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 H3BNH8 94 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 KPNA4O00629 521 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 BCKDKO14874 412 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF264O43296 627 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 NDUFB5O43674 189 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 PIP5K1CO60331 668 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 MAN1A2O60476 641 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 SOX14O95416 240 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 NADKO95544 446 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 MYF6P23409 242 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 POU1F1P28069 291 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 CLK3P49761 638 aaKnown RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 CHN2P52757 468 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 UGT2B15P54855 530 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 ALDH6A1Q02252 535 aaKnown RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 NPRL3Q12980 569 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 TGIF1Q15583 401 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 FNDC7Q5VTL7 733 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 TTC23Q5W5X9 447 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 KLHL17Q6TDP4 642 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 WDR88Q6ZMY6 472 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 PRICKLE2Q7Z3G6 844 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 POGLUT1Q8NBL1 392 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 NR4A3Q92570 626 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 NR1H4Q96RI1 486 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-204ENST00000409727 NODALQ96S42 347 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 CNIH4Q9P003 139 aa11.42□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF292O60281 2723 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 A0A1B0GWA3 101 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms